Pre_GI: BLASTP Hits

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Query: NC_012808:3972983:3977256 Methylobacterium extorquens AM1, complete genome

Start: 3977256, End: 3978278, Length: 1023

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014816:2446236:248138924813892482387999Asticcacaulis excentricus CB 48 chromosome 1, complete sequencekpsf/gutq family protein3e-83308
NC_009620:1504933:1511623151162315126241002Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceKpsF/GutQ family protein7e-83307
NC_018000:3009864:3025529302552930265361008Sinorhizobium fredii USDA 257 chromosome, complete genomephosphosugar isomerase1e-82306
NC_017323:689512:6895126895126905251014Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceKpsF/GutQ family protein5e-79294
NC_006677:2012841:201667720166772017675999Gluconobacter oxydans 621H, complete genomeCapsule expression protein2e-77289
NC_015596:1592500:160406916040691605058990Sinorhizobium meliloti AK83 chromosome 2, complete sequenceKpsF/GutQ family protein1e-74280
NC_003078:578000:594508594508595497990Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative protein involved in assembly, operation or regulation of an export machinery for a cell surface saccharide2e-74279
NC_017326:1122103:113137711313771132366990Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequencehypothetical protein5e-74278
NC_009620:1531000:153729715372971538286990Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceKpsF/GutQ family protein3e-74278
NC_017323:689512:720927720927721916990Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceKpsF/GutQ family protein3e-74278
NC_013939:1023443:103843010384301039392963Deferribacter desulfuricans SSM1, complete genomearabinose-5-phosphate isomerase7e-70264
NC_014758:1489761:149840714984071499369963Calditerrivibrio nitroreducens DSM 19672 chromosome, completekpsf/gutq family protein1e-66253
NC_012918:3009211:304423930442393045207969Geobacter sp. M21 chromosome, complete genomeKpsF/GutQ family protein3e-66252
NC_016148:576946:5984525984525994591008Thermovirga lienii DSM 17291 chromosome, complete genomeKpsF/GutQ family protein4e-64244
NC_013016:1801000:182472218247221825702981Neisseria meningitidis alpha14 chromosome, complete genomeputative sugar isomerase5e-63241
NC_011035:1564821:158762615876261588606981Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeKpsF3e-62238
NC_008751:2988235:3010767301076730117861020Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeKpsF/GutQ family protein5e-61234
NC_008825:4025705:4027008402700840280301023Methylibium petroleiphilum PM1, complete genomeArabinose-5-phosphate isomerase2e-60232
NC_007908:4677856:4703476470347647044771002Rhodoferax ferrireducens T118, complete genomeKpsF/GutQ family protein6e-59228
NC_015437:1685824:168819416881941689174981Selenomonas sputigena ATCC 35185 chromosome, complete genomeKpsF/GutQ family protein3e-58225
NC_012881:4023895:402511440251144026112999Desulfovibrio salexigens DSM 2638, complete genomeKpsF/GutQ family protein2e-57222
NC_016632:1399993:141518214151821416168987Serratia symbiotica str. 'Cinara cedri' chromosome, completeD-arabinose 5-phosphate isomerase2e-57222
NC_008536:3160540:3174259317425931752781020Solibacter usitatus Ellin6076, complete genomeKpsF/GutQ family protein6e-55214
NC_009053:1785447:180252618025261803461936Actinobacillus pleuropneumoniae L20, complete genomearabinose-5-phosphate isomerase8e-54211
NC_016023:729843:734665734665735642978Bacillus coagulans 36D1 chromosome, complete genomeKpsF/GutQ family protein9e-54211
NC_015634:526889:538545538545539522978Bacillus coagulans 2-6 chromosome, complete genomeKpsF/GutQ family protein9e-54210
NC_008253:3161311:317808031780803179063984Escherichia coli 536, complete genomepolysialic acid capsule expression protein KpsF3e-53209
NC_010501:1518959:152586515258651526797933Pseudomonas putida W619, complete genomeKpsF/GutQ family protein3e-53209
NC_007946:3289151:3289151328915132901701020Escherichia coli UTI89, complete genomepolysialic acid capsule synthesis protein KpsF1e-52207
NC_008563:3362058:3362058336205833630771020Escherichia coli APEC O1, complete genomepolysialic acid capsule synthesis protein KpsF1e-52207
NC_011745:3511600:3511600351160035126191020Escherichia coli ED1a chromosome, complete genomePolysialic acid capsule expression protein3e-52206
NC_012967:3012317:3012317301231730133361020Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-52205
NC_009512:4375452:439309043930904394022933Pseudomonas putida F1, complete genomeKpsF/GutQ family protein9e-52204
NC_009465:171000:175535175535176515981Candidatus Vesicomyosocius okutanii HA, complete genomepolysialic acid capsule expression protein4e-51202
NC_009707:1551412:156366215636621564609948Campylobacter jejuni subsp. doylei 269.97 chromosome, completearabinose-5-phosphate isomerase3e-51202
NC_015690:632565:655440655440656411972Paenibacillus mucilaginosus KNP414 chromosome, complete genomearabinose 5-phosphate isomerase2e-51202
NC_008787:1345988:136062913606291361576948Campylobacter jejuni subsp. jejuni 81-176, complete genomearabinose-5-phosphate isomerase1e-50200
NC_014802:1392831:141273714127371413684948Campylobacter jejuni subsp. jejuni ICDCCJ07001 chromosome, completearabinose-5-phosphate isomerase2e-50199
NC_012039:257962:263136263136264092957Campylobacter lari RM2100, complete genomearabinose-5-phosphate isomerase4e-50198
NC_017986:1128879:114320511432051144158954Pseudomonas putida ND6 chromosome, complete genomeKpsF/GutQ family protein6e-49194
NC_011753:206178:212752212752213684933Vibrio splendidus LGP32 chromosome 1, complete genomeputative D-arabinose 5-phosphate isomerase2e-48193
NC_012691:2050957:205750520575052058470966Tolumonas auensis DSM 9187, complete genomeKpsF/GutQ family protein4e-46185
NC_014618:1040381:106821010682101069175966Enterobacter cloacae SCF1 chromosome, complete genomeKpsF/GutQ family protein5e-46185
NC_014033:522363:538631538631539578948Prevotella ruminicola 23 chromosome, complete genomesugar isomerase, KpsF/GutQ family6e-46184
NC_014803:475355:488445488445489377933Pseudoalteromonas sp. SM9913 chromosome chromosome I, completearabinose-5-phosphate isomerase6e-46184
NC_005861:2120633:213683621368362137795960Candidatus Protochlamydia amoebophila UWE25, complete genomeputative Gut Q protein3e-45182
NC_015172:1621223:162578816257881626750963Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeKpsF/GutQ family protein4e-45182
NC_017371:1470582:147058214705821471571990Helicobacter pylori Gambia94/24 chromosome, complete genomearabinose-5-phosphate isomerase3e-41169
NC_012559:1888000:191132519113251912104780Laribacter hongkongensis HLHK9, complete genomeSugar isomerase, KpsF/GutQ family3e-40166
NC_002620:803696:811261811261812247987Chlamydia muridarum Nigg, complete genomecarbohydrate isomerase, KpsF/GutQ family5e-39162
NC_017431:451551:457951457951458937987Chlamydia trachomatis E/11023 chromosome, complete genomecarbohydrate isomerase4e-39162
NC_017439:451535:457935457935458921987Chlamydia trachomatis E/150 chromosome, complete genomecarbohydrate isomerase4e-39162
NC_010280:769639:776039776039777025987Chlamydia trachomatis L2b/UCH-1/proctitis, complete genomecarbohydrate isomerase4e-39162
NC_015744:769907:775709775709776695987Chlamydia trachomatis L2c chromosome, complete genomearabinose 5-phosphate isomerase7e-39161
NC_010287:769600:776000776000776986987Chlamydia trachomatis 434/Bu, complete genomecarbohydrate isomerase7e-39161
NC_004552:235769:235769235769236758990Chlamydophila abortus S26/3, complete genomehypothetical protein1e-38160
NC_008253:2965573:297392329739232974519597Escherichia coli 536, complete genomehypothetical posphosugar isomerase4e-29129
NC_011742:3057444:306560430656043066200597Escherichia coli S88 chromosome, complete genomephosphosugar isomerase4e-28125
NC_007946:3125577:313373731337373134333597Escherichia coli UTI89, complete genomephosphosugar isomerase4e-28125
NC_013361:3823347:383182438318243832420597Escherichia coli O26:H11 str. 11368 chromosome, complete genomeisomerase5e-28125
NC_010498:3023442:303192030319203032516597Escherichia coli SMS-3-5, complete genomeKpsF/GutQ family sugar isomerase5e-28125
NC_011745:3197584:320606132060613206657597Escherichia coli ED1a chromosome, complete genomeputative phosphosugar isomerase6e-28125
NC_014364:815346:828412828412829053642Spirochaeta smaragdinae DSM 11293 chromosome, complete genomesugar isomerase (SIS)3e-21102
NC_007613:2699500:270614327061432706619477Shigella boydii Sb227, complete genomeputative isomerase2e-20100
NC_017095:1927118:194210419421041942694591Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeputative sugar phosphate isomerase involved in capsule formation2e-1377.4
NC_020291:4944835:497570149757014976285585Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative sugar phosphate isomerase involved in capsule formation2e-1377
NC_012559:1888000:191202819120281912333306Laribacter hongkongensis HLHK9, complete genomeSugar phosphate isomerase (Involved in capsule formation) protein1e-0963.9
NC_015931:134601:142997142997143593597Pyrolobus fumarii 1A, complete genomeXRE family transcriptional regulator1e-0861.2
NC_000854:191705:193024193024193455432Aeropyrum pernix K1, complete genomehypothetical protein1e-0758.2
NC_002939:2124642:2158267215826721596971431Geobacter sulfurreducens PCA, complete genomenucleotidyltransferase family protein2e-0757.4
NC_015424:3112637:3139902313990231409631062Aeromonas veronii B565 chromosome, complete genomenucleotidyl transferase1e-0654.3