Pre_GI: BLASTP Hits

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Query: NC_012808:2886282:2902886 Methylobacterium extorquens AM1, complete genome

Start: 2902886, End: 2903749, Length: 864

Host Lineage: Methylobacterium extorquens; Methylobacterium; Methylobacteriaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: First isolated in 1960 in Oxford, England, as an airborne contaminant growing on methylamine. This strain can grow on methylamine or methanol, but not methane. This organism is capable of growth on one-carbon compounds such as methanol. Methanol is oxidized to formaldehyde which is then used metabolically to generate either energy or biomass. These bacteria are commonly found in the environment, especially associated with plants which produce methanol when metabolizing pectin during cell wall synthesis. At least 25 genes are required for this complex process of converting methanol to formaldehyde and this specialized metabolic pathway is of great interest.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2324554:235194023519402352809870Salmonella enterica subsp. enterica serovar Typhimurium str. 798ferredoxin-type protein NapH1e-57223
NC_006905:2355290:236914423691442370013870Salmonella enterica subsp. enterica serovar Choleraesuis strquinol dehydrogenase membrane component2e-57223
NC_012125:1517925:152460115246011525470870Salmonella enterica subsp. enterica serovar Paratyphi C strainquinol dehydrogenase membrane component2e-57223
NC_011083:2375061:240244024024402403309870Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ferredoxin-type protein NapH1e-57223
NC_010102:683444:690094690094690963870Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-57223
NC_011080:2342672:235663223566322357501870Salmonella enterica subsp. enterica serovar Newport str. SL254,ferredoxin-type protein NapH1e-57223
NC_003197:2327474:235486023548602355729870Salmonella typhimurium LT2, complete genomequinol dehydrogenase membrane component1e-57223
NC_016810:2325190:235257623525762353445870Salmonella enterica subsp. enterica serovar Typhimurium strferredoxin-type protein NapH1e-57223
NC_016856:2379027:240641324064132407282870Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Squinol dehydrogenase membrane component1e-57223
NC_016857:2325190:235257623525762353445870Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74quinol dehydrogenase membrane component1e-57223
NC_016860:2323017:235040323504032351272870Salmonella enterica subsp. enterica serovar Typhimurium strquinol dehydrogenase membrane component1e-57223
NC_016863:2324293:235460523546052355474870Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1quinol dehydrogenase membrane component1e-57223
NC_015761:2227500:223762022376202238513894Salmonella bongori NCTC 12419, complete genomeferredoxin-type protein NapH2e-57222
NC_011205:2462025:247602224760222476891870Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853quinol dehydrogenase membrane component2e-57222
NC_011149:2294500:230634323063432307212870Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-57221
NC_003198:2297837:231181123118112312680870Salmonella enterica subsp. enterica serovar Typhi str. CT18,quinol dehydrogenase membrane component5e-57221
NC_004631:685357:692033692033692902870Salmonella enterica subsp. enterica serovar Typhi Ty2, completequinol dehydrogenase membrane component5e-57221
NC_016832:687000:691987691987692856870Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Periplasmic nitrate reductase inner membrane quinol dehydrogenase NapH5e-57221
NC_006511:682863:689539689539690408870Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCquinol dehydrogenase membrane component3e-57221
NC_011147:682897:689573689573690442870Salmonella enterica subsp. enterica serovar Paratyphi A strquinol dehydrogenase membrane protein3e-57221
NC_010067:632683:640655640655641518864Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-57221
NC_011094:2348491:236063823606382361507870Salmonella enterica subsp. enterica serovar Schwarzengrund strquinol dehydrogenase membrane subunit8e-57220
NC_011294:2334979:234895523489552349824870Salmonella enterica subsp. enterica serovar Enteritidis strquinol dehydrogenase membrane protein8e-57220
NC_011274:2325840:233982423398242340693870Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91quinol dehydrogenase membrane component7e-57220
NC_016831:687549:694199694199695068870Salmonella enterica subsp. enterica serovar Gallinarum/pullorumferredoxin-type protein NapH7e-57220
NC_013421:2972269:297544029754402976303864Pectobacterium wasabiae WPP163, complete genomeferredoxin-type protein, NapH/MauN family9e-56217
NC_017187:325229:335544335544336350807Arcobacter butzleri ED-1, complete genomequinol dehydrogenase membrane component2e-50199
NC_007947:577315:578025578025578876852Methylobacillus flagellatus KT, complete genomeFerredoxin-type protein, NapH/MauN family2e-49196
NC_014973:54449:746067460675394789Geobacter sp. M18 chromosome, complete genomeferredoxin-type protein, NapH/MauN family2e-31136
NC_008599:426078:426078426078426974897Campylobacter fetus subsp. fetus 82-40, complete genomeferredoxin-type protein, NapH/MauN family1e-24114
NC_007298:1666480:167782116778211678804984Dechloromonas aromatica RCB, complete genomeFerredoxin-type protein, NapH/MauN family1e-23110
NC_011146:1429836:1429836142983614310591224Geobacter bemidjiensis Bem, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein1e-1273.6
NC_013939:1841890:184189018418901842699810Deferribacter desulfuricans SSM1, complete genomeperiplasmic nitrate reductase NapH6e-1168.2
NC_014828:2038692:208033120803312081044714Ethanoligenens harbinense YUAN-3 chromosome, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein6e-1065.1
NC_014363:2035141:203514120351412036049909Olsenella uli DSM 7084 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0859.3
NC_009089:2150062:217341521734152174311897Clostridium difficile 630, complete genomeputative iron-sulfur-binding membrane protein2e-0756.6
NC_009253:529494:531933531933532631699Desulfotomaculum reducens MI-1 chromosome, complete genome4Fe-4S ferredoxin4e-0755.5
NC_010001:232976:245608245608246474867Clostridium phytofermentans ISDg, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein3e-0652.8
NC_006576:2683467:2683467268346726859832517Synechococcus elongatus PCC 6301, complete genomenitrogen assimilation regulatory protein4e-0652
NC_007604:1586243:1586243158624315887592517Synechococcus elongatus PCC 7942, complete genomenitrogen assimilation regulatory protein4e-0652
NC_011601:1039500:1039534103953410406071074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome(4Fe-4S)-binding protein7e-0651.6
NC_014222:186876:187719187719188441723Methanococcus voltae A3 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein7e-0651.6
NC_013385:1882549:1906910190691019079501041Ammonifex degensii KC4, complete genomeiron-sulfur cluster-binding protein8e-0651.2