Pre_GI: BLASTP Hits

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Query: NC_012207:3063039:3072990 Mycobacterium bovis BCG str. Tokyo 172, complete genome

Start: 3072990, End: 3074117, Length: 1128

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Used for the production of BCG vaccine in Japan. Causative agent of classic bovine tuberculosis. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced. The pathology in cows is similar to the pathology of Mycobacterium tuberculosis in humans, with pulmonary TB leading to chronic debilitation, coughing, and further systemic spread to other organs. In addition, 1 to 2% of infected cows develop mycobacterial mastitis that results in shedding of the bacteria into the milk.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:3110155:3120083312008331212101128Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein0778
NC_002755:3110929:3120445312044531215721128Mycobacterium tuberculosis CDC1551, complete genomeCRISPR-associated TM1807 family protein0778
NC_009565:3128094:3137869313786931389961128Mycobacterium tuberculosis F11, complete genomehypothetical protein0778
NC_002945:3073370:3082802308280230839291128Mycobacterium bovis AF2122/97, complete genomehypothetical protein0778
NC_008769:3070266:3080217308021730813441128Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein0778
NC_000962:3116818:3126240312624031273671128Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein0778
NC_009525:3128786:3138231313823131393581128Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein0778
NC_012943:1279228:1286469128646912875961128Mycobacterium tuberculosis KZN 1435 chromosome, complete genomecsm5 family CRISPR-associated ramp protein0778
NC_016768:1279178:1286413128641312875401128Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein0778
NC_016804:3049631:3059582305958230607091128Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein0778
NC_015848:3175692:3186227318622731873541128Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-165582
NC_019950:3139865:3150610315061031517371128Mycobacterium canettii CIPT 140060008 complete genomeConserved CRISPR-associated protein of unknown function Csm51e-165582
NC_015873:1487127:1499561149956115007421182Megasphaera elsdenii DSM 20460, complete genomeCRISPR-associated RAMP protein5e-1479
NC_014377:532816:5380055380055391261122Thermosediminibacter oceani DSM 16646 chromosome, complete genomeCRISPR-associated RAMP protein, Csm5 family4e-0859.7