Pre_GI: BLASTP Hits

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Query: NC_011985:194973:212356 Agrobacterium radiobacter K84 chromosome 1, complete genome

Start: 212356, End: 213396, Length: 1041

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014483:5015890:5018463501846350195361074Paenibacillus polymyxa E681 chromosome, complete genomeSpermidine/putrescine-binding periplasmic protein7e-75281
NC_016641:1148220:1148220114822011492931074Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein8e-75280
NC_008054:1815723:1828034182803418290951062Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSpermidine/putrescine ABC transporter, substrate binding protein4e-45182
NC_009328:3322802:3336523333652333376141092Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter substrate-binding protein1e-29130
NC_020210:3341976:3355714335571433568021089Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter substrate-binding protein1e-28127
NC_008314:477722:5138795138795149041026Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, periplasmic component: POPT family1e-24114
NC_016590:1380092:1381197138119713823421146Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein7e-24111
NC_019897:3810000:3812967381296738140371071Thermobacillus composti KWC4 chromosome, complete genomespermidine/putrescine-binding periplasmic protein4e-2099.4
NC_010483:1441614:1463190146319014642001011Thermotoga sp. RQ2, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein1e-1894
NC_007948:4620661:4621821462182146228641044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 11e-1791.3
NC_007948:4646344:4656182465618246572251044Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 13e-1789.4
NC_014206:2941575:2955729295572929568021074Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein4e-1789.4
NC_006510:746814:7525867525867536591074Geobacillus kaustophilus HTA426, complete genomespermidine/putrescine ABC transporter (substrate-binding protein)1e-1687.4
NC_012914:469117:4691174691174701871071Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 13e-1686.3
NC_016593:762216:7679087679087689811074Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine-binding periplasmic protein3e-1686.3
NC_008309:1155218:1155218115521811562551038Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein1e-1584.3
NC_012560:4929683:4936837493683749379521116Azotobacter vinelandii DJ, complete genomePolyamine transporter periplasmic protein PotF1e-1584
NC_021150:4929670:4936824493682449379391116Azotobacter vinelandii CA6, complete genomePolyamine transporter periplasmic protein PotF1e-1584
NC_009922:2721343:2741311274131127423571047Alkaliphilus oremlandii OhILAs, complete genomeextracellular solute-binding protein family 11e-1480.5
NC_009718:1470972:1474505147450514755391035Fervidobacterium nodosum Rt17-B1, complete genomeextracellular solute-binding protein2e-1480.5
NC_007948:4646344:4665793466579346668211029Polaromonas sp. JS666, complete genomeextracellular solute-binding protein, family 12e-1480.5
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor2e-1480.1
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein3e-1479.7
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor3e-1479.7
NC_004461:779000:7919067919067929791074Staphylococcus epidermidis ATCC 12228, complete genomepotD protein3e-1479.7
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein1e-1377.8
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein9e-1477.8
NC_009457:1068000:1081457108145710825571101Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein3e-1376.3
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD5e-1375.9
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein6e-1375.5
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein6e-1375.5
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein8e-1375.1
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein8e-1375.1
NC_009439:101174:1242421242421253361095Pseudomonas mendocina ymp, complete genomeextracellular solute-binding protein1e-1274.3
NC_014010:1850500:1899804189980419008741071Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeABC transporter substrate-binding protein2e-1273.6
NC_007650:84140:9424394243952741032Burkholderia thailandensis E264 chromosome II, complete sequenceputrescine ABC transporter, periplasmic putrescine-binding protein, putative4e-1272.4
NC_009831:1255995:1257662125766212587621101Shewanella sediminis HAW-EB3, complete genomeextracellular solute-binding protein, family 16e-1272
NC_008391:2404443:2414978241497824160241047Burkholderia cepacia AMMD chromosome 2, complete sequenceextracellular solute-binding protein, family 17e-1272
NC_016048:1930089:1955292195529219563651074Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter spermidine/putrescine-binding protein1e-1170.9
NC_009078:74954:8604786047870781032Burkholderia pseudomallei 1106a chromosome II, complete sequenceABC transport system, exported substrate-binding protein3e-1170.1
NC_007435:1914375:1924940192494019262981359Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative ABC transport system, exported substrate-binding protein3e-1169.7
NC_004129:3965947:3982527398252739836271101Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein4e-1169.3
NC_015379:6714545:6732759673275967338591101Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative ABC transporter, periplasmic component5e-1168.9
NC_002505:1507860:1521892152189215229291038Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein5e-1168.9
NC_009457:1068000:1080309108030910813461038Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein5e-1168.9
NC_012578:1465302:1479334147933414803711038Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein5e-1168.9
NC_012668:2115228:2121142212114221221791038Vibrio cholerae MJ-1236 chromosome 1, complete sequenceputrescine ABC transporter putrescine-binding protein PotF5e-1168.9
NC_016445:984856:9988879988879999241038Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine transport system substrate-binding protein5e-1168.9
NC_016944:1504888:1518920151892015199571038Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein5e-1168.9
NC_008309:1289370:1310334131033413114191086Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein6e-1168.6
NC_010519:1802294:1824678182467818257631086Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein7e-1168.6
NC_002947:4362271:4368119436811943692281110Pseudomonas putida KT2440, complete genomeABC transporter, periplasmic polyamine-binding protein, putative8e-1168.2
NC_008312:4358134:4377026437702643780901065Trichodesmium erythraeum IMS101, complete genomeextracellular solute-binding protein, family 19e-1168.2
NC_007929:111092:1330981330981341831086Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSpermidine/putrescine-binding protein2e-1067.4
NC_016612:3361802:3379230337923033803421113Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter periplasmic-binding protein1e-1067.4
NC_017059:3404000:3404073340407334052271155Rhodospirillum photometricum DSM 122, complete genomeSpermidine/putrescine-binding periplasmic protein2e-1066.6
NC_013173:2305394:2305394230539423064311038Desulfomicrobium baculatum DSM 4028, complete genomeextracellular solute-binding protein family 13e-1066.6
NC_020134:1328302:1342631134263113436891059Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system substarte-binding protein PotD3e-1066.6
NC_014221:38000:5405354053551231071Truepera radiovictrix DSM 17093 chromosome, complete genomeextracellular solute-binding protein family 15e-1065.5
NC_013524:969038:9810049810049822211218Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeextracellular solute-binding protein family 15e-1065.5
NC_002947:4167500:4241729424172942428321104Pseudomonas putida KT2440, complete genomeperiplasmic polyamine-binding protein, putative6e-1065.5
NC_006510:2044347:2055331205533120564371107Geobacillus kaustophilus HTA426, complete genomeABC transporter (substrate-binding protein)8e-1065.1
NC_017150:2290681:2318414231841423195441131Acetobacter pasteurianus IFO 3283-01-42C, complete genometransporter substrate-binding periplasmic protein3e-0963.2
NC_006351:73000:8666886668876991032Burkholderia pseudomallei K96243 chromosome 2, complete sequenceABC transport system, exported substrate-binding protein3e-0962.8
NC_009075:92210:1059791059791070101032Burkholderia pseudomallei 668 chromosome II, complete sequenceputative ABC transporter, periplasmic solute-binding protein3e-0962.8
NC_007005:2686551:2706875270687527079271053Pseudomonas syringae pv. syringae B728a, complete genomeextracellular solute-binding protein, family 12e-0860.5
NC_016751:1776669:179397517939751794946972Marinitoga piezophila KA3 chromosome, complete genomeABC transporter substrate-binding protein1e-0757.8
NC_016625:944925:9598379598379608711035Burkholderia sp. YI23 chromosome 2, complete sequenceSpermidine/putrescine-binding periplasmic protein4e-0756.2
NC_015385:2135456:2153331215333121543801050Treponema succinifaciens DSM 2489 chromosome, complete genomeextracellular solute-binding protein family 17e-0755.1
NS_000195:1257834:1279723127972312807781056Candidatus Cloacamonas acidaminovoranshypothetical protein3e-0653.1
NC_020829:940692:9802589802589813701113Pseudomonas denitrificans ATCC 13867, complete genomeextracellular solute-binding protein4e-0652.8