Pre_GI: BLASTP Hits

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Query: NC_011979:537862:559967 Geobacter sp. FRC-32, complete genome

Start: 559967, End: 560272, Length: 306

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:6463939:647460564746056475003399Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ArsR-family transcriptional regulator2e-1064.3
NC_016768:1769332:177193717719371772344408Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeArsR family transcriptional regulator8e-1062.4
NC_012943:1769445:177205017720501772457408Mycobacterium tuberculosis KZN 1435 chromosome, complete genometranscriptional regulator, arsR-family8e-1062.4
NC_015848:2684275:269985926998592700266408Mycobacterium canettii CIPT 140010059, complete genomeputative transcriptional regulatory protein8e-1062.4
NC_010612:4501414:451756645175664517961396Mycobacterium marinum M, complete genometranscriptional regulatory protein (probably ArsR-family)8e-1062.4
NC_009525:2635792:265321426532142653621408Mycobacterium tuberculosis H37Ra, complete genomeArsR family transcriptional regulator8e-1062.4
NC_009921:5202607:523007052300705230411342Frankia sp. EAN1pec, complete genometranscriptional regulator, ArsR family1e-0962
NC_013851:3392644:341428834142883414653366Allochromatium vinosum DSM 180 chromosome, complete genometranscriptional regulator, ArsR family1e-0962
NC_013947:5546315:556240055624005562693294Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, ArsR family1e-0961.6
NC_021177:1736854:176129817612981761639342Streptomyces fulvissimus DSM 40593, complete genomeMetal-dependent regulatory protein2e-0961.2
NC_014758:1573023:158751315875131587806294Calditerrivibrio nitroreducens DSM 19672 chromosome, completetranscriptional regulator, arsr family2e-0960.8
NC_007907:4714844:472729147272914727599309Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0960.8
NC_021177:1736854:176424917642491764662414Streptomyces fulvissimus DSM 40593, complete genomeTranscriptional regulator4e-0960.1
NC_014165:374674:393843393843394226384Thermobispora bispora DSM 43833 chromosome, complete genomeArsR family transcriptional regulator4e-0960.1
NC_013131:9976929:997692999769299977285357Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, ArsR family6e-0959.7
NC_016582:93754:111589111589111936348Streptomyces bingchenggensis BCW-1 chromosome, complete genomeArsR family transcriptional regulator6e-0959.3
NC_007333:1743890:179373217937321794109378Thermobifida fusca YX, complete genomeregulatory protein, ArsR7e-0959.3
NC_014624:224213:230275230275230568294Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator8e-0959.3
NC_002937:1706000:172482917248291725173345Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetranscriptional regulator, ArsR family8e-0958.9
NC_008751:1736512:174308417430841743428345Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeregulatory protein, ArsR8e-0958.9
NC_008789:707916:726020726020726676657Halorhodospira halophila SL1, complete genomeRhodanese domain protein1e-0858.5
NC_016887:1680338:169785716978571698207351Nocardia cyriacigeorgica GUH-2, complete genomeputative transcriptional regulator2e-0857.8
NC_015152:1230995:124599212459921246294303Spirochaeta sp. Buddy chromosome, complete genomeArsR family transcriptional regulator3e-0857.4
NC_013522:1538994:154380215438021544134333Thermanaerovibrio acidaminovorans DSM 6589, complete genometranscriptional regulator, ArsR family3e-0857.4
NC_016627:689406:699099699099699380282Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator3e-0857.4
NC_011830:1288984:131316613131661313486321Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, ArsR family3e-0857.4
NC_013510:5309143:532537453253745325715342Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, ArsR family3e-0857
NC_011658:2275864:229761822976182297917300Bacillus cereus AH187 chromosome, complete genomeArsR family transcriptional regulator5e-0856.6
NC_012472:2240000:226178722617872262086300Bacillus cereus 03BB102, complete genometranscriptional regulator, ArsR family5e-0856.6
NC_008726:3947917:396234839623483962761414Mycobacterium vanbaalenii PYR-1, complete genomeregulatory protein, ArsR5e-0856.6
NC_016582:93754:112145112145112474330Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transcriptional regulator5e-0856.2
NC_015572:293665:296443296443296754312Methylomonas methanica MC09 chromosome, complete genomeregulatory protein ArsR6e-0856.2
NC_011772:2166000:218802121880212188320300Bacillus cereus G9842, complete genometranscriptional regulator, ArsR family6e-0856.2
NC_012918:4648220:465282746528274653174348Geobacter sp. M21 chromosome, complete genomeArsR family transcriptional regulator6e-0856.2
NC_007907:5185510:525847652584765258850375Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0755.5
NC_018866:154252:163003163003163350348Dehalobacter sp. DCA chromosome, complete genometranscriptional regulator, ArsR family1e-0755.5
NC_005042:1422000:143704014370401437351312Prochlorococcus marinus subsp. marinus str. CCMP1375, completeTranscriptional regulator1e-0755.1
NC_016616:1336000:133618313361831336509327Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator1e-0755.1
NC_007520:1940120:194745719474571947765309Thiomicrospira crunogena XCL-2, complete genometranscriptional regulator, ArsR family2e-0754.7
NC_005071:1064000:107919610791961079525330Prochlorococcus marinus str. MIT 9313, complete genomeBacterial regulatory proteins, ArsR family2e-0754.7
NC_016641:2476634:248635824863582486618261Paenibacillus terrae HPL-003 chromosome, complete genomeArsR family transcriptional regulator2e-0754.3
NC_014655:2705482:272572927257292726058330Leadbetterella byssophila DSM 17132 chromosome, complete genometranscriptional regulator, arsr family3e-0754.3
NC_009921:5202607:522723152272315227563333Frankia sp. EAN1pec, complete genometranscriptional regulator, ArsR family3e-0753.9
NC_012032:4385311:438939943893994389698300Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, ArsR family3e-0753.9
NC_014391:1317957:132134013213401321678339Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein ArsR3e-0753.9
NC_010175:4375265:437934743793474379652306Chloroflexus aurantiacus J-10-fl, complete genomeregulatory protein ArsR3e-0753.9
NC_010003:449192:471582471582471902321Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family4e-0753.5
NC_010003:449192:452964452964453326363Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family4e-0753.5
NC_014538:1598106:160048016004801600854375Thermoanaerobacter sp. X513 chromosome, complete genomeArsR family transcriptional regulator4e-0753.5
NC_010320:1268355:131352813135281313902375Thermoanaerobacter sp. X514 chromosome, complete genomeregulatory protein ArsR4e-0753.5
NC_008820:968423:986976986976987254279Prochlorococcus marinus str. MIT 9303, complete genomebacterial regulatory proteins, ArsR family protein3e-0753.5
NC_014972:1407632:142032214203221420657336Desulfobulbus propionicus DSM 2032 chromosome, complete genomeArsR family transcriptional regulator3e-0753.5
NC_016627:4323370:432693843269384327312375Clostridium clariflavum DSM 19732 chromosome, complete genomeputative transcriptional regulator5e-0753.1
NC_014377:1985714:198916819891681989536369Thermosediminibacter oceani DSM 16646 chromosome, complete genomeregulatory protein ArsR5e-0753.1
NC_013851:3166969:317024431702443170582339Allochromatium vinosum DSM 180 chromosome, complete genometranscriptional regulator, ArsR family7e-0752.8
NC_015388:2211828:223330822333082233595288Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeregulatory protein ArsR6e-0752.8
NC_014172:166485:200155200155200448294Bacillus thuringiensis BMB171 plasmid pBMB171, complete sequencehypothetical protein8e-0752.4
NC_003888:7561923:760165476016547602007354Streptomyces coelicolor A3(2), complete genomeArsR-family transcriptional regulator8e-0752.4
NC_015690:3477573:351892035189203519240321Paenibacillus mucilaginosus KNP414 chromosome, complete genomeArsR family transcriptional regulator1e-0652
NC_016948:678939:682177682177682524348Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein1e-0652
NC_010545:11950:359783597836325348Corynebacterium urealyticum DSM 7109, complete genomeputative transcriptional regulator (ArsR family)1e-0652
NC_009441:3522519:353669235366923537021330Flavobacterium johnsoniae UW101 chromosome, complete genomeregulatory protein ArsR1e-0652
NC_003888:7561923:760674476067447607052309Streptomyces coelicolor A3(2), complete genomeArsR-family transcriptional regulator1e-0652
NC_009486:1737703:174468517446851745011327Thermotoga petrophila RKU-1 chromosome, complete genomeregulatory protein ArsR1e-0652
NC_014150:648868:673088673088673456369Brachyspira murdochii DSM 12563 chromosome, complete genometranscriptional regulator, ArsR family2e-0651.6
NC_007298:750361:758128758128758538411Dechloromonas aromatica RCB, complete genomeregulatory protein, ArsR1e-0651.6
NC_016947:666627:669866669866670213348Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein1e-0651.6
NC_017904:666285:667724667724668071348Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-0651.6
NC_014328:180482:183193183193183558366Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative transcriptional regulator1e-0651.6
NC_013921:2375900:239606923960692396476408Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, ArsR family1e-0651.6
NC_010943:2422838:245329124532912453605315Stenotrophomonas maltophilia K279a, complete genomeputative ArsR family transcriptional regulator2e-0651.2
NC_012881:2405414:241820424182042418548345Desulfovibrio salexigens DSM 2638, complete genometranscriptional regulator, ArsR family2e-0651.2
NC_015312:4658548:467946846794684679830363Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeArsR family transcriptional regulator2e-0651.2
NC_007907:5185510:522420452242045224521318Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0650.8
NC_013131:9976929:998141199814119981782372Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, ArsR family2e-0650.8
NC_018681:867230:897050897050897496447Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein2e-0650.8
NC_015424:3890293:391242239124223912724303Aeromonas veronii B565 chromosome, complete genometranscription activator HlyU2e-0650.8
NC_014377:1985714:198979219897921990124333Thermosediminibacter oceani DSM 16646 chromosome, complete genometranscriptional regulator, ArsR family2e-0650.8
NC_011899:2165814:216699921669992167340342Halothermothrix orenii H 168, complete genomeregulatory protein ArsR3e-0650.4
NC_016633:3069518:313530331353033135677375Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative transcriptional regulator3e-0650.4
NC_013929:2696648:270057927005792700893315Streptomyces scabiei 87.22 chromosome, complete genomeArsR family transcriptional regulator3e-0650.4
NC_012780:189949:204441204441204740300Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequenceArsR family transcriptional regulator4e-0650.1
NC_010003:449192:466448466448466822375Petrotoga mobilis SJ95, complete genometranscriptional regulator, ArsR family4e-0650.1
NC_014410:800500:837621837621837995375Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,transcriptional regulator, ArsR family4e-0650.1
NC_014355:3669470:368372436837243684089366Candidatus Nitrospira defluvii, complete genomeputative ArsR family transcriptional regulator5e-0649.7
NC_015660:1869962:188067018806701881017348Geobacillus thermoglucosidasius C56-YS93 chromosome, completeArsR family transcriptional regulator6e-0649.7
NC_015555:211935:225995225995226309315Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeregulatory protein ArsR8e-0649.3
NC_003888:7561923:757060675706067570968363Streptomyces coelicolor A3(2), complete genomeArsR-family transcriptional regulator9e-0648.9