Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:2696648 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
26966482697046399hypothetical proteinBLASTP
26971342698027894transposaseQuickGO ontologyBLASTP
26980152698443429channel transporterQuickGO ontology
269869726997551059NADH binding oxidoreductaseQuickGO ontologyBLASTP
26997522700543792channel transporterQuickGO ontologyBLASTP
27005792700893315ArsR family transcriptional regulatorQuickGO ontologyBLASTP
27009702701599630protein phosphataseQuickGO ontologyBLASTP
27016472702066420protein phosphataseQuickGO ontologyBLASTP
27020712703036966thioredoxin reductaseQuickGO ontologyBLASTP
27030692703395327thioredoxinQuickGO ontologyBLASTP
270381427048901077regulatory proteinQuickGO ontologyBLASTP
270489427060511158hypothetical protein
27060712706688618hypothetical protein
270747327086061134hypothetical proteinBLASTP
270888027101811302tRNA methyltransferaseQuickGO ontologyBLASTP
271031827124232106hypothetical proteinBLASTP
27128962713567672potassium uptake proteinQuickGO ontologyBLASTP
27135672714244678potassium uptake proteinQuickGO ontologyBLASTP
27143262715084759hypothetical proteinBLASTP