Pre_GI: BLASTP Hits

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Query: NC_011961:304158:333259 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 333259, End: 334704, Length: 1446

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014098:2332938:2332938233293823342751338Bacillus tusciae DSM 2912 chromosome, complete genomepotassium uptake protein, TrkH family2e-46187
NC_019978:2071435:2092298209229820936321335Halobacteroides halobius DSM 5150, complete genomepotassium uptake protein, TrkH family3e-45183
NC_019978:2071435:2090202209020220915271326Halobacteroides halobius DSM 5150, complete genomepotassium uptake protein, TrkH family1e-43177
NC_014221:266638:2809972809972823551359Truepera radiovictrix DSM 17093 chromosome, complete genomepotassium uptake protein, TrkH family5e-43176
NC_014378:425779:4257794257794271161338Acetohalobium arabaticum DSM 5501 chromosome, complete genomepotassium uptake protein, TrkH family3e-40166
NC_007802:3575739:3612219361221936135681350Jannaschia sp. CCS1, complete genomeK+ transporter Trk1e-36154
NC_011295:929293:9499389499389512871350Coprothermobacter proteolyticus DSM 5265, complete genomeKtrB7e-36152
NC_014976:1174430:1197858119785811991951338Bacillus subtilis BSn5 chromosome, complete genomepotassium transporter ATPase2e-35150
UCMB5137:2128500:2129178212917821305151338Bacillus atrophaeus UCMB-5137potassium transporter ATPase4e-34145
NC_013161:4209554:4216841421684142182051365Cyanothece sp. PCC 8802, complete genomepotassium uptake protein, TrkH family2e-33143
NC_006274:1367377:1369801136980113711441344Bacillus cereus E33L, complete genomepotassium/sodium uptake protein7e-33142
NC_011658:1437813:1440043144004314413861344Bacillus cereus AH187 chromosome, complete genomeTrkH family potassium uptake protein1e-32141
NC_011969:1437514:1439744143974414410871344Bacillus cereus Q1 chromosome, complete genomepotassium uptake protein, trkh family1e-32141
NC_016771:1397292:1399522139952214008651344Bacillus cereus NC7401, complete genomeTrkH family potassium uptake protein1e-32141
NC_007929:67810:8631086310876981389Lactobacillus salivarius subsp. salivarius UCC118, complete genomePotassium uptake protein ktrB1e-32141
NC_014210:618500:6397136397136411341422Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,H(+)-transporting two-sector ATPase9e-33141
NC_014335:1329414:1331851133185113331941344Bacillus cereus biovar anthracis str. CI chromosome, completepotassium/sodium uptake protein2e-32140
NC_012659:1334000:1335099133509913364421344Bacillus anthracis str. A0248, complete genomepotassium uptake protein, TrkH family3e-32140
NC_012581:2885519:2902653290265329039961344Bacillus anthracis str. CDC 684 chromosome, complete genomeTrkH family potassium uptake protein3e-32140
NC_005945:1334000:1335145133514513364881344Bacillus anthracis str. Sterne, complete genomepotassium uptake protein, TrkH family3e-32140
NC_007530:1332768:1335199133519913365421344Bacillus anthracis str. 'Ames Ancestor', complete genomepotassium uptake protein, trkh family3e-32140
NC_003997:1334000:1335076133507613364191344Bacillus anthracis str. Ames, complete genomepotassium uptake protein, TrkH family3e-32140
NC_014171:1356000:1358119135811913594621344Bacillus thuringiensis BMB171 chromosome, complete genomepotassium uptake protein KtrB6e-32139
NC_016779:1321723:1321723132172313230661344Bacillus cereus F837/76 chromosome, complete genomeTrkH family potassium uptake protein3e-32139
NC_011772:1329730:1329730132973013310731344Bacillus cereus G9842, complete genomepotassium uptake protein, TrkH family8e-32138
NC_011725:1383798:1386313138631313876561344Bacillus cereus B4264 chromosome, complete genomeTrkH family potassium uptake protein1e-31138
NC_004722:1352000:1354522135452213558651344Bacillus cereus ATCC 14579, complete genomePotassium uptake protein KtrB1e-31138
NC_010184:1373375:1373375137337513747181344Bacillus weihenstephanensis KBAB4, complete genomepotassium uptake protein, TrkH family1e-31137
NC_014166:33138:4990249902512301329Arcobacter nitrofigilis DSM 7299 chromosome, complete genomepotassium uptake protein, TrkH family1e-28127
NC_013441:4539035:4547292454729245486231332Gordonia bronchialis DSM 43247, complete genomeH(+)-transporting two-sector ATPase6e-28125
NC_014965:2200974:2218747221874722201171371Vibrio vulnificus MO6-24/O chromosome I, complete sequencepotassium uptake protein, integral membrane component, KtrB1e-27124
NC_011961:304158:3348873348873362931407Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencepotassium uptake protein KtrB, putative2e-26120
NC_013440:5543667:5545397554539755475262130Haliangium ochraceum DSM 14365, complete genomeH(+)-transporting two-sector ATPase3e-26120
NC_015977:935798:9357989357989371351338Roseburia hominis A2-183 chromosome, complete genometrk system potassium uptake protein TrkH6e-26119
NC_004347:4441110:4461229446122944625931365Shewanella oneidensis MR-1, complete genomepotassium uptake protein KtrB4e-26119
NC_012781:3087467:3105370310537031067311362Eubacterium rectale ATCC 33656, complete genomehypothetical protein2e-25117
NC_004663:6104875:6113157611315761149861830Bacteroides thetaiotaomicron VPI-5482, complete genomeK+ uptake protein4e-25116
NC_013595:5221330:5221330522133052226881359Streptosporangium roseum DSM 43021, complete genomeH(+)-transporting two-sector ATPase4e-24112
NC_015930:1397524:1401561140156114028981338Lactococcus garvieae ATCC 49156, complete genomepotassium transporter protein9e-24112
NC_014933:2195683:2211784221178422136131830Bacteroides helcogenes P 36-108 chromosome, complete genomeH(+)-transporting two-sector ATPase5e-22106
NC_017208:1380870:138087013808701381517648Bacillus thuringiensis serovar chinensis CT-43 chromosome, completepotassium uptake protein KtrB2e-1894
NC_014759:2099623:2117651211765121194711821Marivirga tractuosa DSM 4126 chromosome, complete genomeh(+)-transporting two-sector atpase3e-1893.6
NC_012225:47800:5909659096608531758Brachyspira hyodysenteriae WA1, complete genomecation transport protein TrkH4e-1893.2
NC_017243:2190000:2232236223223622339931758Brachyspira intermedia PWS/A chromosome, complete genomecation transport protein TrkH2e-1790.9
NC_014759:2099623:2115804211580421176271824Marivirga tractuosa DSM 4126 chromosome, complete genomeh(+)-transporting two-sector atpase5e-1582.8