Pre_GI: BLASTP Hits

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Query: NC_011769:247202:260446 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 260446, End: 260712, Length: 267

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016629:3789554:3807920380792038089751056Desulfovibrio africanus str. Walvis Bay chromosome, completevirulence protein-like protein2e-24110
NC_010498:4856011:4865478486547848665121035Escherichia coli SMS-3-5, complete genomehypothetical protein5e-24109
NC_015663:1356982:1380699138069913817361038Enterobacter aerogenes KCTC 2190 chromosome, complete genomeDNA-binding protein2e-22104
NC_016863:3905875:3913032391303239140691038Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein3e-22103
NC_014507:1127115:1142721114272111437851065Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein2e-21100
NC_014828:501342:5066335066335076671035Ethanoligenens harbinense YUAN-3 chromosome, complete genomehypothetical protein2e-2097.8
NC_016609:8772011:878213587821358783121987Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein1e-1995.1
NC_016860:3964000:397467439746743975666993Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein2e-1994.7
NC_015711:8964410:8995481899548189965361056Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-1889.7
NC_007086:3805390:3814061381406138151431083Xanthomonas campestris pv. campestris str. 8004, complete genomevirulence protein5e-1889.7
NC_007508:1324000:1331921133192113330151095Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein1e-1788.6
NC_010688:3740399:3748371374837137494531083Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-1788.6
NC_004663:3827521:3849918384991838509341017Bacteroides thetaiotaomicron VPI-5482, complete genomehypothetical protein1e-1685.1
NC_007969:1664500:1681171168117116821811011Psychrobacter cryohalolentis K5, complete genomeDeath-on-curing protein1e-1684.7
NC_013592:446092:4557244557244567701047Dickeya dadantii Ech586, complete genomehypothetical protein2e-1684.7
NC_013943:2705983:2713815271381527148551041Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein4e-1683.6
NC_014972:247028:2470282470282480861059Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein5e-1683.2
NC_015222:3137167:314307531430753143317243Nitrosomonas sp. AL212 chromosome, complete genome6e-1682.8
NC_013410:2586500:259017725901772591175999Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein7e-1682.8
NC_014246:651801:6720626720626731111050Mobiluncus curtisii ATCC 43063 chromosome, complete genomeDNA-binding protein2e-1581.3
NC_010524:4644587:4671873467187346729731101Leptothrix cholodnii SP-6, complete genomehypothetical protein2e-1580.9
NC_007508:570000:5791265791265801361011Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative DNA-binding protein1e-1478.2
NC_003902:555699:5663915663915674011011Xanthomonas campestris pv. campestris str. ATCC 33913, completeDNA-binding protein2e-1477.4
NC_007086:557789:5684815684815694911011Xanthomonas campestris pv. campestris str. 8004, complete genomeDNA-binding protein2e-1477.4
NC_007406:3354000:3374542337454233755701029Nitrobacter winogradskyi Nb-255, complete genomeputative DNA-binding protein3e-1477
NC_014365:2810405:282201028220102822468459Desulfarculus baarsii DSM 2075 chromosome, complete genomehypothetical protein7e-1475.9
NC_006270:4149004:4167710416771041687141005Bacillus licheniformis ATCC 14580, complete genomehypothetical protein9e-1475.5
NC_015572:4618467:4637972463797246390001029Methylomonas methanica MC09 chromosome, complete genomehypothetical protein1e-1375.1
NC_010831:788500:7911527911527922041053Chlorobium phaeobacteroides BS1, complete genomehypothetical protein1e-1375.1
NC_009051:1455183:1486718148671814877941077Methanoculleus marisnigri JR1, complete genomehypothetical protein2e-1374.7
NC_008786:1936626:194921019492101949482273Verminephrobacter eiseniae EF01-2, complete genomeDNA-binding protein4e-1373.2
NC_008340:1303607:1314633131463313156341002Alkalilimnicola ehrlichei MLHE-1, complete genomeDeath-on-curing protein5e-1373.2
NC_014217:2760898:2773982277398227750071026Starkeya novella DSM 506 chromosome, complete genomeputative DNA-binding protein7e-1372.8
NC_020211:103371:125633125633125860228Serratia marcescens WW4, complete genomeputative DNA-binding protein2e-1270.9
NC_016832:3858815:3870827387082738718551029Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1270.9
NC_015160:2145915:216327521632752164270996Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative DNA-binding protein6e-1269.7
NC_011832:1535740:154409015440901544818729Candidatus Methanosphaerula palustris E1-9c, complete genomehypothetical protein6e-1269.7
NC_002937:1764117:1782972178297217839851014Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein7e-1269.3
NC_009943:272158:2721582721582732191062Candidatus Desulfococcus oleovorans Hxd3, complete genomeconserved hypothetical protein7e-1269.3
NC_008942:875060:8795138795138805921080Methanocorpusculum labreanum Z, complete genomehypothetical protein1e-1168.6
NC_003228:401513:417101417101417817717Bacteroides fragilis NCTC 9343, complete genomehypothetical protein2e-1168.2
NC_014246:1457992:148411314841131485069957Mobiluncus curtisii ATCC 43063 chromosome, complete genomeDNA-binding protein4e-1166.6
NC_015311:510661:520188520188521177990Prevotella denticola F0289 chromosome, complete genomephosphoribosylaminoimidazolesuccinocarboxamide synthase1e-1065.5
NC_006347:451216:470545470545471402858Bacteroides fragilis YCH46, complete genomeputative DNA-binding protein1e-1065.5
NC_016776:449150:468466468466469338873Bacteroides fragilis 638R, complete genomehypothetical protein9e-1165.5
NC_006513:1547092:1552842155284215538551014Azoarcus sp. EbN1, complete genomeDNA-binding protein2e-1064.7
NC_003116:988000:99980099980010008101011Neisseria meningitidis Z2491, complete genomeDNA-binding protein4e-1063.5
NC_003112:844000:8539088539088549181011Neisseria meningitidis MC58, complete genomehypothetical protein4e-1063.5
NC_017512:760000:7706157706157716251011Neisseria meningitidis WUE 2594, complete genomehypothetical protein4e-1063.5
NC_017516:1439775:1449132144913214501421011Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein4e-1063.5
NC_013410:1591500:1591826159182615928811056Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein4e-1063.5
NC_013410:3787626:380066838006683801576909Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DNA-binding protein1e-0962.4
NC_003198:3881221:389654038965403897523984Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative DNA-binding protein2e-0961.2
NC_015581:1731120:174189917418991742081183Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome2e-0961.2
NC_009663:1656804:166778816677881668648861Sulfurovum sp. NBC37-1, complete genomehypothetical protein6e-0959.7
NC_013171:342714:384867384867385184318Anaerococcus prevotii DSM 20548, complete genomeputative cytoplasmic protein7e-0959.3
NC_018866:2484500:249252724925272493420894Dehalobacter sp. DCA chromosome, complete genomePutative DNA-binding protein in cluster with Type I restriction-modification system1e-0858.5
NC_012108:1067876:1081573108157310826011029Desulfobacterium autotrophicum HRM2, complete genomepredicted death-on-curing family protein2e-0857.8
NC_015696:285456:296840296840297826987Francisella sp. TX077308 chromosome, complete genomeputative DNA-binding protein4e-0857
NC_013410:1651000:166929616692961669790495Fibrobacter succinogenes subsp. succinogenes S85 chromosome,Virulence protein-like protein4e-0857
NC_012778:1573847:1579564157956415806071044Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-0857
NC_013959:2449315:245510724551072456099993Sideroxydans lithotrophicus ES-1 chromosome, complete genomefilamentation induced by cAMP protein Fic5e-0856.6
NC_014033:3462437:347019434701943471165972Prevotella ruminicola 23 chromosome, complete genomedeath-on-curing family protein1e-0755.5
NC_014370:885937:9193189193189203491032Prevotella melaninogenica ATCC 25845 chromosome chromosome I,death-on-curing family protein2e-0754.7
NC_011420:69843:7982179821808491029Rhodospirillum centenum SW, complete genomeDNA-binding protein, putative2e-0754.7
NC_014933:510164:5446985446985457261029Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein2e-0754.7
NC_015321:4287945:4309308430930843103331026Fluviicola taffensis DSM 16823 chromosome, complete genomehypothetical protein3e-0753.9
NC_021150:5298500:5306685530668553077581074Azotobacter vinelandii CA6, complete genomecytoplasmic protein3e-0753.9
NC_012560:5338707:5348793534879353498661074Azotobacter vinelandii DJ, complete genomecytoplasmic protein3e-0753.9
NC_015311:2059879:2092124209212420931251002Prevotella denticola F0289 chromosome, complete genomedeath-on-curing family protein6e-0753.1
NC_008786:2729635:2738304273830427393081005Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein5e-0753.1
NC_002946:684728:693136693136693369234Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein5e-0753.1
NC_015160:2002570:202630220263022027132831Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative DNA-binding protein6e-0752.8
NC_017511:884083:895939895939896172234Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomehypothetical protein6e-0752.8
NC_011035:968569:979850979850980083234Neisseria gonorrhoeae NCCP11945 chromosome, complete genomehypothetical protein6e-0752.8
NC_014655:1396672:1404930140493014059371008Leadbetterella byssophila DSM 17132 chromosome, complete genomehypothetical protein1e-0652
NC_013889:1740858:1754992175499217559961005Thioalkalivibrio sp. K90mix chromosome, complete genomedeath-on-curing family protein1e-0652
NC_006322:4149500:416782541678254168742918Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-0652
NC_015500:484984:5020565020565031381083Treponema brennaborense DSM 12168 chromosome, complete genomevirulence protein2e-0651.2
NC_020156:861402:866495866495867487993Nonlabens dokdonensis DSW-6, complete genomeputative DNA-binding protein3e-0650.8
NC_009714:1329573:135071513507151351542828Campylobacter hominis ATCC BAA-381, complete genome4e-0650.4
NC_010995:764567:7739767739767750341059Cellvibrio japonicus Ueda107, complete genomeRhuM-like protein4e-0650.1
NC_010278:315941:3228483228483238491002Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hypothetical protein6e-0649.7
NC_008786:3323167:335994333599433360938996Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein6e-0649.7
NC_010939:321492:327773327773328681909Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative DNA-binding protein6e-0649.7