Pre_GI: BLASTP Hits

Some Help

Query: NC_011601:4096427:4107073 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4107073, End: 4107651, Length: 579

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013361:5319497:536017553601755360753579Escherichia coli O26:H11 str. 11368 chromosome, complete genometranslocator EspA6e-85313
NC_013364:3701895:372468737246873725265579Escherichia coli O111:H- str. 11128, complete genometranslocon EspA2e-84311
NC_013353:3669500:368304736830473683625579Escherichia coli O103:H2 str. 12009, complete genometranslocon EspA1e-79295
AP010958:3669500:368304736830473683625579Escherichia coli O103:H2 str. 12009 DNA, complete genometranslocon EspA1e-79295
NC_002655:4653160:466212246621224662700579Escherichia coli O157:H7 EDL933, complete genomesecreted protein EspA2e-78291
NC_002695:4584177:459313945931394593717579Escherichia coli O157:H7 str. Sakai, complete genomeEspA2e-78291
NC_013008:4643825:465228446522844652862579Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein EspA2e-78291
NC_013941:4470932:448064944806494481227579Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeespA2e-78291
NC_011353:4688000:469624346962434696680438Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprotein EspA2e-65248
NC_005085:2774370:278572527857252786279555Chromobacterium violaceum ATCC 12472, complete genomeprobable secreted protein EspA5e-0960.8
NC_005085:2774370:278384227838422784402561Chromobacterium violaceum ATCC 12472, complete genomeprobable secreted protein EspA6e-0960.5
NC_014012:2565329:258322025832202583795576Shewanella violacea DSS12, complete genomesecreted protein EspA, putative3e-0754.7
NC_012125:2360815:238167423816742382264591Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island effector protein1e-0653.1
NC_006905:1509093:152162215216221522212591Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SseB2e-0652.8
NC_011274:1763676:178453517845351785125591Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island effector protein4e-0651.2
NC_011083:1476894:148944914894491490039591Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,secretion system effector SseB4e-0651.2
NC_011205:1852665:187352418735241874114591Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853secretion system effector SseB6e-0650.8
NC_003198:1621347:164220616422061642796591Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island effector effector protein6e-0650.8
NC_004631:1325817:133834013383401338930591Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island effector protein6e-0650.8
NC_011080:1470794:148337414833741483964591Salmonella enterica subsp. enterica serovar Newport str. SL254,secretion system effector SseB6e-0650.8
NC_003197:1471349:148393414839341484524591Salmonella typhimurium LT2, complete genometranslocation machinery component6e-0650.8
NC_011294:1723852:174471117447111745301591Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island effector protein6e-0650.8
NC_016810:1428201:144078614407861441376591Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein6e-0650.8
NC_016832:1324820:133731313373131337903591Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Secreted effector protein sseB6e-0650.8
NC_017046:1428272:144089914408991441447549Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island effector effector protein5e-0650.8
NC_016863:1429516:144210114421011442691591Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1enhanced serine sensitivity protein SseB6e-0650.8
NC_016860:1469066:148162114816211482211591Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island effector protein6e-0650.8
NC_016857:1428201:144078614407861441376591Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative pathogenicity island effector protein6e-0650.8
NC_016856:1481325:149391014939101494500591Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stranslocation machinery component6e-0650.8
NC_011147:1502096:152295515229551523545591Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island effector protein6e-0650.4
NC_006511:1506915:152777415277741528364591Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island effector effector protein6e-0650.4
NC_010102:1616530:163738916373891637979591Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0650.4
NC_011094:1435347:144783914478391448429591Salmonella enterica subsp. enterica serovar Schwarzengrund strsecretion system effector protein SseB8e-0650.1