Pre_GI: BLASTP Hits

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Query: NC_011147:4297513:4318148 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 4318148, End: 4318624, Length: 477

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:4571833:459192545919254592440516Salmonella enterica subsp. enterica serovar Typhimurium str. 798FxsA protein8e-52202
NC_006905:4486433:450742345074234507899477Salmonella enterica subsp. enterica serovar Choleraesuis strsuppresses F exclusion of bacteriophage T79e-52202
NC_011205:4564645:458523545852354585711477Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853FxsA9e-52202
NC_016856:4563435:458555345855534586029477Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SFxsA protein9e-52202
NC_003197:4551880:457268345726834573198516Salmonella typhimurium LT2, complete genomesuppressor of F exclusion of bacteriophage T78e-52202
NC_011274:4385039:440588144058814406396516Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91FxsA protein8e-52202
NC_016810:4573172:459326445932644593779516Salmonella enterica subsp. enterica serovar Typhimurium strFxsA protein8e-52202
NC_016857:4573173:459326545932654593780516Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74FxsA protein8e-52202
NC_016863:4513106:453312045331204533635516Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1FxsA protein8e-52202
NC_016612:1840325:184208518420851842576492Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage T7 F exclusion suppressor FxsA2e-46184
NC_016845:411844:413618413618414094477Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,FxsA protein1e-44178
NC_013850:4993307:501350150135015013977477Klebsiella variicola At-22 chromosome, complete genomeFxsA cytoplasmic membrane protein1e-44178
NC_011283:5170683:519144251914425191918477Klebsiella pneumoniae 342 chromosome, complete genomeFxsA protein1e-44178
NC_009648:4958500:496030049603004960791492Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeFxsA9e-45178
NC_012731:403670:405429405429405920492Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeFxsA9e-45178
NC_011745:4862218:488731248873124887788477Escherichia coli ED1a chromosome, complete genomeFxsA protein2e-42171
NC_004431:4955658:497769849776984978174477Escherichia coli CFT073, complete genomeFxsA protein2e-42171
NC_020181:3518396:353818135381813538651471Enterobacter aerogenes EA1509E, complete genomeFxsA protein3e-42170
NC_013956:455000:472352472352472813462Pantoea ananatis LMG 20103 chromosome, complete genomeFxsA7e-33139
NC_013961:3269368:326854232685423269408867Erwinia amylovora, complete genomeProtein fxsA1e-31135
NC_007712:532500:550797550797551252456Sodalis glossinidius str. 'morsitans', complete genomephage suppressor of F exclusion9e-22102
NC_017200:4401945:440956144095614409950390Bacillus thuringiensis serovar finitimus YBT-020 chromosome,phage T7 F exclusion suppressor FxsA3e-0754.3
NC_014541:475350:531234531234531731498Ferrimonas balearica DSM 9799 chromosome, complete genomeFxsA cytoplasmic membrane protein4e-0753.9
NC_007530:4400152:440572744057274406116390Bacillus anthracis str. 'Ames Ancestor', complete genomefxsa cytoplasmic membrane protein, putative4e-0753.9
NC_005945:4399756:440628944062894406678390Bacillus anthracis str. Sterne, complete genomefxsA cytoplasmic membrane protein, putative4e-0753.9
NC_014335:4327584:433410743341074334496390Bacillus cereus biovar anthracis str. CI chromosome, completecytoplasmic membrane protein4e-0753.9
NC_006274:4448293:445400744540074454396390Bacillus cereus E33L, complete genomefxsA cytoplasmic membrane protein4e-0753.9
NC_003997:4399067:440560044056004405989390Bacillus anthracis str. Ames, complete genomefxsA cytoplasmic membrane protein, putative4e-0753.9
NC_012659:4399094:440562744056274406016390Bacillus anthracis str. A0248, complete genomeFxsA4e-0753.9
NC_011658:4379274:438338443833844383773390Bacillus cereus AH187 chromosome, complete genomeFxsA3e-0753.9
NC_016771:4333000:433716743371674337556390Bacillus cereus NC7401, complete genomefxsA cytoplasmic membrane protein3e-0753.9
NC_016779:4361140:436781643678164368205390Bacillus cereus F837/76 chromosome, complete genomehypothetical protein6e-0753.1
NC_012472:4400420:440315944031594403548390Bacillus cereus 03BB102, complete genomeputative fxsA cytoplasmic membrane protein6e-0753.1
NC_011725:4562709:456548245654824565871390Bacillus cereus B4264 chromosome, complete genomeFxsA protein1e-0652
NC_010184:4425676:443111344311134431502390Bacillus weihenstephanensis KBAB4, complete genomeFxsA cytoplasmic membrane protein6e-0650.1