Pre_GI: BLASTP Hits

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Query: NC_010994:3477000:3493442 Rhizobium etli CIAT 652, complete genome

Start: 3493442, End: 3494782, Length: 1341

Host Lineage: Rhizobium etli; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It is a nitrogen-fixing symbiotic bacteria that interacts with the root of the common bean plant Phaseolus vulgaris. The molecular biology and evolution of R. etli and its relation to other nitrogen/fixing symbionts has been well studied. The genomic sequence will provide information on the process of symbiosis, on the genetic systems that allow the survival and adaptations of this bacteria to the soil, and on the evolutionary relationship and the symbiosis origin of this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011369:3022235:3036512303651230378191308Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeHlyD family type I secretion membrane fusion protein0711
NC_010511:3674178:3751366375136637526731308Methylobacterium sp. 4-46 chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-92340
NC_014834:2206119:2230989223098922323561368Rhodopseudomonas palustris DX-1 chromosome, complete genomeHlyD family type I secretion membrane fusion protein8e-91334
NC_010511:2775465:2783680278368027849421263Methylobacterium sp. 4-46 chromosome, complete genomeHlyD family type I secretion membrane fusion protein8e-90331
NC_008435:3915110:3923991392399139252921302Rhodopseudomonas palustris BisA53, complete genometype I secretion membrane fusion protein, HlyD family8e-89327
NC_010511:3674178:3679096367909636804391344Methylobacterium sp. 4-46 chromosome, complete genomeHlyD family type I secretion membrane fusion protein4e-84312
NC_010997:910938:9316689316689329781311Rhizobium etli CIAT 652 plasmid pC, complete sequenceputative toxin secretion protein3e-81302
NC_011420:365505:3747223747223760831362Rhodospirillum centenum SW, complete genomeHlyD family secretion protein3e-68259
NC_008435:1131242:1133468113346811348261359Rhodopseudomonas palustris BisA53, complete genometype I secretion membrane fusion protein, HlyD family3e-63243
NC_013960:2761353:2783986278398627851191134Nitrosococcus halophilus Nc4 chromosome, complete genome5e-60232
NC_017326:1122103:1122103112210311235931491Sinorhizobium meliloti SM11 plasmid pSmeSM11d, complete sequencetype I secretion membrane fusion protein2e-56219
NC_015596:1592500:1594304159430415957941491Sinorhizobium meliloti AK83 chromosome 2, complete sequencetype I secretion membrane fusion protein HlyD family2e-56219
NC_007484:2045500:2058831205883120601981368Nitrosococcus oceani ATCC 19707, complete genomeType I secretion membrane fusion protein, HlyD2e-55217
NC_014315:1396990:1399906139990614012731368Nitrosococcus watsoni C-113 chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-55216
NC_002947:1988652:2018723201872320200481326Pseudomonas putida KT2440, complete genomeHlyD family secretion protein2e-54213
NC_015733:1555476:1599470159947016007951326Pseudomonas putida S16 chromosome, complete genomeHlyD family secretion protein3e-53209
NC_012416:531772:5317725317725333641593Wolbachia sp. wRi, complete genomesecretion protein, HlyD family8e-50198
NC_005295:272708:2727082727082742521545Ehrlichia ruminantium str. Welgevonden, complete genomeputative secretion protein6e-50198
NC_006832:252952:2529522529522544961545Ehrlichia ruminantium str. Welgevonden, complete genomeAlkaline protease secretion protein aprE6e-50198
NC_008599:426078:4387734387734400561284Campylobacter fetus subsp. fetus 82-40, complete genomeSapE2e-49197
NC_009439:794498:7998497998498011651317Pseudomonas mendocina ymp, complete genomeHlyD family type I secretion membrane fusion protein3e-49196
NC_006831:250074:2500742500742516181545Ehrlichia ruminantium str. Gardel, complete genomeAlkaline protease secretion protein aprE3e-49196
NC_002978:618723:6367746367746382941521Wolbachia endosymbiont of Drosophila melanogaster, complete genomesecretion protein, HlyD family4e-49196
NC_005773:1135374:1172090117209011734121323Pseudomonas syringae pv. phaseolicola 1448A, complete genomeHlyD family secretion protein1e-48194
NC_007354:233991:2339912339912355081518Ehrlichia canis str. Jake, complete genomeType I secretion membrane fusion protein, HlyD6e-48192
NC_014836:223013:2459562459562472571302Desulfurispirillum indicum S5 chromosome, complete genomeHlyD family type I secretion membrane fusion protein7e-48191
NC_006833:409599:4095994095994110441446Wolbachia endosymbiont strain TRS of Brugia malayi, completeMembrane-fusion protein2e-46187
NC_015731:447411:4474114474114487631353Nitrosomonas sp. Is79A3 chromosome, complete genometype I secretion membrane fusion protein, HlyD family3e-46186
NC_014006:611592:6249736249736263311359Sphingobium japonicum UT26S chromosome 1, complete genomeHlyD-family secretion protein6e-45182
NC_019973:5601346:5601346560134656026831338Mesorhizobium australicum WSM2073, complete genometype I secretion membrane fusion protein, HlyD family2e-44180
NC_004463:8401060:8417280841728084186411362Bradyrhizobium japonicum USDA 110, complete genomeHlyD family secretion protein3e-41169
NC_010510:139685:1559961559961573601365Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completetype I secretion membrane fusion protein, HlyD family5e-41169
NC_012912:2426520:2426520242652024278661347Dickeya zeae Ech1591, complete genometype I secretion membrane fusion protein, HlyD family8e-41168
NC_020064:1547524:1574437157443715757681332Serratia marcescens FGI94, complete genometype I secretion membrane fusion protein, HlyD family9e-38158
NC_005140:444353:4534704534704548101341Vibrio vulnificus YJ016 chromosome II, complete sequencemembrane-fusion protein3e-37156
NC_014966:431342:4414234414234427631341Vibrio vulnificus MO6-24/O chromosome II, complete sequencemembrane-fusion protein4e-37155
NC_004460:1718088:1728169172816917295091341Vibrio vulnificus CMCP6 chromosome II, complete sequenceMembrane-fusion protein4e-37155
NC_007949:9839:2214222142231911050Polaromonas sp. JS666 plasmid 1, complete sequencesecretion protein HlyD5e-36152
NC_016616:1861852:1866496186649618679051410Dechlorosoma suillum PS chromosome, complete genomeHlyD family type I secretion membrane fusion protein9e-36151
NC_012850:4422966:4441647444164744429961350Rhizobium leguminosarum bv. trifolii WSM1325, complete genometype I secretion membrane fusion protein, HlyD family5e-34145
NC_008391:404388:4116534116534128791227Burkholderia cepacia AMMD chromosome 2, complete sequencetype I secretion membrane fusion protein, HlyD family3e-31136
NC_020211:1704500:1733040173304017343711332Serratia marcescens WW4, complete genomeHlyD family type I secretion membrane fusion protein4e-31136
NC_015567:1660462:1691443169144316927741332Serratia sp. AS9 chromosome, complete genometype I secretion membrane fusion protein, HlyD family9e-31135
NC_015566:1659288:1691431169143116927621332Serratia sp. AS12 chromosome, complete genometype I secretion membrane fusion protein, HlyD family9e-31135
NC_009832:1719149:1748151174815117494821332Serratia proteamaculans 568, complete genometype I secretion membrane fusion protein, HlyD family1e-30134
NC_015424:2695847:2708779270877927101971419Aeromonas veronii B565 chromosome, complete genomesecretion protein, HlyD family2e-30133
NC_008570:3013263:3030376303037630317941419Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesecretion protein, HlyD family1e-29131
NC_014121:2090630:2107605210760521087801176Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeRtxD/HlyD/CyaD protein of type I secretion system2e-29130
NC_015968:2195645:2215989221598922171641176Enterobacter asburiae LF7a chromosome, complete genomeHlyD family type I secretion membrane fusion protein2e-28126
NC_013889:1382705:1401521140152114029451425Thioalkalivibrio sp. K90mix chromosome, complete genometype I secretion membrane fusion protein, HlyD family3e-28126
NC_014931:5470242:5480046548004654812151170Variovorax paradoxus EPS chromosome, complete genometype I secretion membrane fusion protein, HlyD family3e-28126
NC_005085:1870890:1879136187913618802841149Chromobacterium violaceum ATCC 12472, complete genomesecretion protein4e-28126
NC_009802:647901:6519956519956534611467Campylobacter concisus 13826, complete genomeacriflavine resistance protein5e-28125
NC_011138:3182807:3186481318648131878481368Alteromonas macleodii 'Deep ecotype', complete genomeHlyD family secretion protein2e-27124
NC_017192:1745114:1759951175995117613301380Arcobacter sp. L, complete genomesecretion protein1e-26121
NC_007626:3393940:3410349341034934116801332Magnetospirillum magneticum AMB-1, complete genomeMembrane-fusion protein5e-26119
NC_020063:1051310:1066040106604010672301191Enterobacteriaceae bacterium strain FGI 57, complete genomemultidrug resistance efflux pump2e-25117
NC_014166:2498500:2531271253127125327071437Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHlyD family type I secretion membrane fusion protein1e-24114
NC_020209:5077410:5095119509511950964951377Pseudomonas poae RE*1-1-14, complete genomeType I secretion membrane fusion protein, HlyD2e-24114
NC_013173:2305394:2317529231752923189711443Desulfomicrobium baculatum DSM 4028, complete genometype I secretion membrane fusion protein, HlyD family2e-24114
NC_014117:2684631:2690239269023926914831245Burkholderia sp. CCGE1002 chromosome chromosome 1, completetype I secretion membrane fusion protein, HlyD family3e-24113
NC_017192:276187:2834902834902850071518Arcobacter sp. L, complete genomeHlyD family secretion protein3e-24113
NC_004431:324000:3395113395113407731263Escherichia coli CFT073, complete genomePutative membrane spanning export protein6e-24112
NC_009076:2027478:2045412204541220468211410Burkholderia pseudomallei 1106a chromosome I, complete sequenceHlyD family secretion protein4e-24112
NC_013223:685628:6856286856286869711344Desulfohalobium retbaense DSM 5692, complete genometype I secretion membrane fusion protein, HlyD family9e-24111
NC_006350:1938631:1938631193863119400461416Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative toxin-related secretion protein1e-23111
NC_007434:2424884:2444512244451224459271416Burkholderia pseudomallei 1710b chromosome I, complete sequenceHlyD family secretion protein1e-23111
NC_006350:1909639:1938631193863119400461416Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative toxin-related secretion protein1e-23111
NC_012791:4680500:4698703469870347000191317Variovorax paradoxus S110 chromosome 1, complete genometype I secretion membrane fusion protein, HlyD family3e-23109
NC_006138:2397652:2421156242115624224451290Desulfotalea psychrophila LSv54, complete genomesimilar to secretion proteins9e-23108
NC_011094:2791719:2795286279528627964761191Salmonella enterica subsp. enterica serovar Schwarzengrund strtype I secretion membrane fusion protein, HlyD family protein6e-23108
NC_011083:2847318:2850885285088528520751191Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type I secretion membrane fusion protein, HlyD family2e-22107
NC_016863:2844883:2844883284488328460461164Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1HlyD family secretion protein2e-22107
NC_016856:2896630:2896630289663028977931164Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SHlyD family secretion protein2e-22107
NC_010067:191190:2170292170292182191191Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-22107
NC_007512:771975:8001618001618013421182Pelodictyon luteolum DSM 273, complete genomemetalloprotease secretion protein2e-22107
NC_012125:2826624:2841730284173028429201191Salmonella enterica subsp. enterica serovar Paratyphi C straintype I secretion protein2e-22107
NC_006905:2857699:2859860285986028610501191Salmonella enterica subsp. enterica serovar Choleraesuis strputative HlyD family secretion protein2e-22107
NC_013716:3109700:3140026314002631413061281Citrobacter rodentium ICC168, complete genomeputative membrane fusion protein of T1SS3e-22106
NC_010338:4530403:4528997452899745304061410Caulobacter sp. K31, complete genometype I secretion membrane fusion protein, HlyD family3e-21103
NC_014366:2904500:2918387291838729197421356Gamma proteobacterium HdN1, complete genomeType I secretion membrane fusion protein (Hemolysin secretion protein D)3e-20100
NC_014837:1570500:1590312159031215915441233Pantoea sp. At-9b chromosome, complete genomeHlyD family type I secretion membrane fusion protein5e-2099.4
NC_005126:3630459:3666606366660636679941389Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-1996.7
NC_014844:1634985:1638056163805616394801425Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype I secretion membrane fusion protein, HlyD family3e-1996.7
NC_015856:3170771:3183539318353931849811443Collimonas fungivorans Ter331 chromosome, complete genomeputative HlyD family secretion protein3e-1996.7
NC_009784:1591851:1611002161100216123751374Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein4e-1996.7
NC_004347:4302768:4308263430826343095881326Shewanella oneidensis MR-1, complete genomeHlyD family secretion protein5e-1996.3
NC_008253:4735418:4759981475998147614171437Escherichia coli 536, complete genomehemolysin D7e-1995.5
NC_016147:2266419:2274851227485122762751425Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemembrane-fusion protein8e-1995.1
NC_007946:4779745:4821373482137348228091437Escherichia coli UTI89, complete genomehemolysin D9e-1995.1
NC_014166:1478469:1508985150898515101511167Arcobacter nitrofigilis DSM 7299 chromosome, complete genomesecretion protein HlyD family protein1e-1894.7
NC_004431:3409389:3424183342418334256191437Escherichia coli CFT073, complete genomeHemolysin D2e-1894
NC_014006:3124818:3149328314932831507191392Sphingobium japonicum UT26S chromosome 1, complete genomeHlyD-family secretion protein2e-1894
NC_008314:2611873:2613152261315226144891338Ralstonia eutropha H16 chromosome 2, complete sequenceRTX toxin membrane fusion protein2e-1894
NC_008319:1081614:1096473109647310980081536Synechococcus sp. CC9311, complete genomeHlyD family secretion protein domain protein2e-1894
NC_015138:2270181:2276522227652222780421521Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completetype I secretion membrane fusion protein, HlyD family1e-1791.7
NC_004556:1641985:1647876164787616492971422Xylella fastidiosa Temecula1, complete genomehemolysin secretion protein D1e-1791.3
NC_012751:275336:2774522774522788281377Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative ABC associated RTX toxin transporter, HlyD/MFP family2e-1790.9
NC_020829:2022000:2031456203145620328711416Pseudomonas denitrificans ATCC 13867, complete genomeHlyD family secretion protein7e-1789
NC_014355:3435343:3449865344986534512561392Candidatus Nitrospira defluvii, complete genomeputative type I secretion membrane fusion protein HlyD8e-1788.6
NC_004463:6924150:6922739692273969242801542Bradyrhizobium japonicum USDA 110, complete genomeprobable Hemolysin secretion protein D9e-1788.6
NC_014931:5594946:5613772561377256150881317Variovorax paradoxus EPS chromosome, complete genometype I secretion membrane fusion protein, HlyD family9e-1788.6
NC_015856:2146713:2170136217013621715151380Collimonas fungivorans Ter331 chromosome, complete genometype I secretion membrane fusion protein, HlyD1e-1688.6
NC_020064:2299950:2305668230566823069961329Serratia marcescens FGI94, complete genometype I secretion membrane fusion protein, HlyD family1e-1688.2
NC_013416:1748848:1753967175396717554001434Aggregatibacter actinomycetemcomitans D11S-1, complete genomehemolysin D1e-1688.2
NC_017082:6444522:6468731646873164698911161Bradyrhizobium sp. S23321, complete genomehemolysin secretion protein D3e-1687
NC_016513:2103958:2108061210806121094941434Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completehemolysin D3e-1686.7
NC_010552:2331486:2335417233541723367601344Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype I secretion membrane fusion protein, HlyD family8e-1685.1
NC_010515:2037825:2055046205504620563891344Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetype I secretion membrane fusion protein, HlyD family2e-1583.6
NC_014012:1097938:1100244110024411016531410Shewanella violacea DSS12, complete genomeHlyD family secretion protein3e-1583.6
NC_009254:637952:6399486399486413661419Burkholderia vietnamiensis G4 chromosome 3, complete sequenceHlyD family type I secretion membrane fusion protein4e-1583.2
NC_011566:1016858:1024295102429510257041410Shewanella piezotolerans WP3, complete genomeType I secretion membrane fusion protein, HlyD4e-1583.2
NC_012912:1229333:123955012395501240374825Dickeya zeae Ech1591, complete genomebiotin/lipoyl attachment domain-containing protein6e-1582.4
NC_014394:1554373:1572230157223015736541425Gallionella capsiferriformans ES-2 chromosome, complete genometype I secretion membrane fusion protein, HlyD family1e-1481.3
NC_009445:6424000:6437645643764564390541410Bradyrhizobium sp. ORS 278 chromosome, complete genomeHlyD family secretion protein2e-1481.3
NC_005126:1549066:1549066154906615504211356Photorhabdus luminescens subsp. laumondii TTO1, complete genomeRTX toxin ABC transporter protein (MFP) RtxD2e-1480.9
NC_014012:3812754:3824021382402138254421422Shewanella violacea DSS12, complete genomeHlyD family secretion protein2e-1480.5
NC_017517:1807072:1808544180854418099711428Neisseria meningitidis M01-240355 chromosome, complete genomeHlyD family type I secretion membrane fusion protein4e-1479.7
NC_017505:1783476:1784948178494817863751428Neisseria meningitidis alpha710 chromosome, complete genomeputative periplasmic type I secretion system protein4e-1479.7
NC_014393:3494863:3496289349628934975631275Clostridium cellulovorans 743B chromosome, complete genomesecretion protein HlyD family protein2e-1377.4
NC_010278:1467146:1474432147443214758651434Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,RTX-III toxin determinant D2e-1377.4
NC_015677:2939301:2953066295306629544301365Ramlibacter tataouinensis TTB310 chromosome, complete genomeCyaD protein5e-1375.9
NC_007604:1967770:1978129197812919794541326Synechococcus elongatus PCC 7942, complete genomehemolysin secretion protein-like2e-1067.8
NC_006576:2328427:2337595233759523389201326Synechococcus elongatus PCC 6301, complete genomesimilar to hemolysin secretion protein2e-1067.8
NC_005773:951744:9603919603919617431353Pseudomonas syringae pv. phaseolicola 1448A, complete genometype I secretion membrane fusion protein, HlyD family2e-1067.4
NC_012779:2064582:2078636207863620799731338Edwardsiella ictaluri 93-146, complete genometype I secretion membrane fusion protein, HlyD family3e-1067
NC_003272:3237643:3242898324289832444211524Nostoc sp. PCC 7120, complete genomehypothetical protein2e-0963.9
NC_010997:910938:9109389109389123831446Rhizobium etli CIAT 652 plasmid pC, complete sequenceputative protein secretion protein, HlyD family4e-0963.2
NC_008435:1215437:1231399123139912328351437Rhodopseudomonas palustris BisA53, complete genometype I secretion membrane fusion protein, HlyD family2e-0861.2
NC_007513:75197:1247271247271259801254Synechococcus sp. CC9902, complete genomehemolysin secretion protein-like2e-0757.8
NC_014532:1191267:1202488120248812037771290Halomonas elongata DSM 2581, complete genomeK020222e-0757.4
NC_015732:2449900:2457876245787624590271152Spirochaeta caldaria DSM 7334 chromosome, complete genomesecretion protein HlyD family protein4e-0756.6
NC_010067:3310336:3345938334593833472151278Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0654.7
NC_009925:4044691:4059349405934940609021554Acaryochloris marina MBIC11017, complete genomeHlyD family secretion protein2e-0653.9
NC_006576:456569:4674314674314691341704Synechococcus elongatus PCC 6301, complete genomehypothetical protein3e-0653.9
NC_007604:1145373:1151670115167011533731704Synechococcus elongatus PCC 7942, complete genomehypothetical protein3e-0653.9
NC_005071:87907:1078341078341092191386Prochlorococcus marinus str. MIT 9313, complete genomepossible transporter for efflux4e-0653.1
NC_017267:29461:4006140061413291269Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completemembrane-fusion protein, putative6e-0652.4
NC_007335:1159000:1165380116538011665131134Prochlorococcus marinus str. NATL2A, complete genomepossible transporter component9e-0652