Pre_GI: BLASTP Hits

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Query: NC_010729:1385217:1404353 Porphyromonas gingivalis ATCC 33277, complete genome

Start: 1404353, End: 1405375, Length: 1023

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain was isolated from human gingiva. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin. Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003228:2929006:293547129354712936403933Bacteroides fragilis NCTC 9343, complete genomeputative cobalamin biosynthesis protein2e-104379
NC_006347:2861498:286149828614982862463966Bacteroides fragilis YCH46, complete genomecobalamin biosynthesis protein CobD3e-104378
NC_016776:2913966:292043129204312921363933Bacteroides fragilis 638R, complete genomeputative cobalamin biosynthesis protein4e-104377
NC_015437:1038476:104071810407181041683966Selenomonas sputigena ATCC 35185 chromosome, complete genomecobalamin biosynthesis protein CobD3e-44179
NC_009617:1487110:150014515001451501092948Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecobalamin biosynthesis protein3e-44179
NC_011296:1151346:115037211503721151349978Thermodesulfovibrio yellowstonii DSM 11347, complete genomecobalamin biosynthesis protein CobD1e-43177
NC_005126:3485330:349817934981793499138960Photorhabdus luminescens subsp. laumondii TTO1, complete genomecobalamin biosynthesis protein3e-43176
NC_012962:1827000:183203818320381832997960Photorhabdus asymbiotica, complete genomecobalamin biosynthesis protein cobd4e-43175
NC_020291:1593143:160630016063001607253954Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecobalamin biosynthesis protein CobD1e-42173
NC_013517:1055854:110338011033801104306927Sebaldella termitidis ATCC 33386, complete genomecobalamin biosynthesis protein CobD3e-42172
NC_011898:1558208:159067815906781591640963Clostridium cellulolyticum H10, complete genomecobalamin biosynthesis protein CobD1e-41171
NC_021182:1245692:124916912491691250125957Clostridium pasteurianum BC1, complete genomecobalamin biosynthesis protein CobD1e-41170
NC_013892:853366:866699866699867673975Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalamin biosynthesis protein cbiB5e-41168
NC_019903:1058657:107193710719371072902966Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,adenosylcobinamide-phosphate synthase9e-41167
NC_016627:4203775:420979642097964210749954Clostridium clariflavum DSM 19732 chromosome, complete genomecobalamin biosynthesis protein CobD5e-40165
NC_014328:3482980:350108435010843502058975Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalamin biosynthesis protein CobD2e-39162
NC_014633:442755:475895475895476860966Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceadenosylcobinamide-phosphate synthase2e-38159
NC_014622:1514416:151867815186781519649972Paenibacillus polymyxa SC2 chromosome, complete genomecobalamin biosynthesis protein cobd6e-38158
NC_014483:1376500:138088013808801381851972Paenibacillus polymyxa E681 chromosome, complete genomeCobalamin biosynthesis protein cobD2e-37156
NC_016641:3173250:317791331779133178884972Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin biosynthesis protein cobd5e-37155
NC_015565:624298:641487641487642434948Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalamin biosynthesis protein cbiB2e-36153
NC_012491:1263469:126987812698781270828951Brevibacillus brevis NBRC 100599, complete genomecobalamin biosynthesis protein7e-36151
NC_013595:8162181:8167677816767781687861110Streptosporangium roseum DSM 43021, complete genomeadenosylcobinamide-phosphate synthase7e-35148
NC_009925:3344894:3358626335862633596451020Acaryochloris marina MBIC11017, complete genomecobalamin biosynthesis protein CbiB3e-34146
NC_018524:557666:562851562851563756906Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomecobD/Cbib family protein1e-33144
NC_009253:2927802:293205129320512932998948Desulfotomaculum reducens MI-1 chromosome, complete genomecobalamin biosynthesis protein CobD4e-33142
NC_007951:1042291:106750810675081068443936Burkholderia xenovorans LB400 chromosome 1, complete sequenceCobalamin biosynthesis protein CbiB5e-31135
NC_012997:3651993:367338736733873674331945Teredinibacter turnerae T7901, complete genomecobalamin biosynthesis protein CobD5e-30132
NC_014210:4122514:412316941231694124056888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cobalamin biosynthesis protein CobD8e-30131
NC_019673:967559:970326970326971288963Saccharothrix espanaensis DSM 44229 complete genomeCobalamin biosynthesis protein CobD2e-29130
NC_013407:1177731:118437411843741185318945Methanocaldococcus vulcanius M7, complete genomecobalamin biosynthesis protein CobD2e-29129
NC_014122:842560:845687845687846625939Methanocaldococcus infernus ME chromosome, complete genomecobalamin biosynthesis protein CobD4e-29129
NC_008782:3361850:336432533643253365302978Acidovorax sp. JS42, complete genomecobalamin biosynthesis protein CobD5e-28125
NC_009718:1470972:147966014796601480544885Fervidobacterium nodosum Rt17-B1, complete genomecobalamin biosynthesis protein CobD2e-27123
NC_015680:691457:707734707734708600867Pyrococcus yayanosii CH1 chromosome, complete genomecobalamin biosynthesis protein3e-27122
NC_014974:1076565:110312311031231103968846Thermus scotoductus SA-01 chromosome, complete genomecobalamin biosynthesis protein CobD1e-26120
NC_005070:1588419:158841915884191589411993Synechococcus sp. WH 8102, complete genomeputative cobalamin biosynthetic protein1e-24114
NC_018012:1789028:181314018131401814102963Thiocystis violascens DSM 198 chromosome, complete genomecobalamin biosynthesis protein CobD4e-23108
NC_007181:333891:351460351460352395936Sulfolobus acidocaldarius DSM 639, complete genomecobalamin biosynthesis protein5e-21102
NC_007516:774489:8073538073538083991047Synechococcus sp. CC9605, complete genomecobalamin biosynthesis protein CobD6e-21101
NC_002607:1178690:117914511791451180071927Halobacterium sp. NRC-1, complete genomehypothetical protein1e-1894
NC_008701:1226797:124557812455781246453876Pyrobaculum islandicum DSM 4184, complete genomecobalamin biosynthesis protein CbiB7e-1685.1
NC_008148:672608:682997682997683902906Rubrobacter xylanophilus DSM 9941, complete genomecobalamin biosynthesis protein CobD7e-1168.6
NC_009457:2095366:209819820981982099151954Vibrio cholerae O395 chromosome 2, complete sequenceadenosylcobinamide-phosphate synthase5e-0652.4
NC_012578:2479150:248198224819822482935954Vibrio cholerae M66-2 chromosome I, complete sequenceadenosylcobinamide-phosphate synthase5e-0652.4
NC_012582:2626786:262961826296182630571954Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative cobalamin biosynthesis protein CbiB5e-0652.4
NC_012668:1036000:104874710487471049700954Vibrio cholerae MJ-1236 chromosome 1, complete sequenceadenosylcobinamide-phosphate synthase5e-0652.4
NC_016445:2012294:201512320151232016076954Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeadenosylcobinamide-phosphate synthase CobD5e-0652.4
NC_016944:2588435:259126425912642592217954Vibrio cholerae IEC224 chromosome I, complete sequenceadenosylcobinamide-phosphate synthase5e-0652.4
NC_002505:2537655:254496625449662545919954Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeadenosylcobinamide-phosphate synthase5e-0652.4