Pre_GI: BLASTP Hits

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Query: NC_010501:734363:748742 Pseudomonas putida W619, complete genome

Start: 748742, End: 749794, Length: 1053

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:4999946:5007641500764150086781038Pseudomonas fluorescens F113 chromosome, complete genomeDNA-cytosine methyltransferase2e-161568
NC_010120:1065833:1077592107759210786141023Neisseria meningitidis 053442, complete genomemodification methylase (cytosine-specific DNA methylase)8e-114410
NC_015593:2103815:2130241213024121313471107Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA-cytosine methyltransferase4e-102371
NC_012731:600518:6298186298186308701053Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative site-specific DNA methylase7e-97353
NC_009648:5119271:5143503514350351445551053Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative site-specific DNA methylas9e-97353
NC_009076:3564500:3597115359711535981491035Burkholderia pseudomallei 1106a chromosome I, complete sequencemodification methylase HgiDII1e-96353
NC_016585:417979:4293494293494304551107Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceCytosine-specific methyltransferase HgiDII5e-96351
NC_017249:8510121:8517199851719985182991101Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-95348
NC_014365:2843126:2876804287680428779191116Desulfarculus baarsii DSM 2075 chromosome, complete genomeDNA-cytosine methyltransferase8e-95347
NC_008312:7169309:7192816719281671938531038Trichodesmium erythraeum IMS101, complete genomeDNA-cytosine methyltransferase1e-92340
NC_011283:3379181:3410092341009234111351044Klebsiella pneumoniae 342 chromosome, complete genomeDNA-cytosine methyltransferase1e-90333
NC_014216:2538500:2547093254709325481841092Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeDNA-cytosine methyltransferase8e-90330
NC_009972:606393:6142136142136152771065Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeDNA-cytosine methyltransferase6e-88324
NC_020388:1100759:1117093111709311182021110Natronomonas moolapensis 8.8.11 complete genomesite-specific DNA-methyltransferase (cytosine-specific)1e-80300
NC_014664:1614568:1623354162335416244451092Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeDNA-cytosine methyltransferase7e-75281
NC_020388:1100759:1119051111905111201631113Natronomonas moolapensis 8.8.11 complete genomesite-specific DNA-methyltransferase (cytosine-specific)8e-72270
NC_019964:3028469:3052298305229830534131116Halovivax ruber XH-70, complete genomesite-specific DNA methylase5e-70265
NC_016612:5231065:5247595524759552486531059Klebsiella oxytoca KCTC 1686 chromosome, complete genomemodification methylase1e-56220
NC_013441:1487058:1514873151487315159011029Gordonia bronchialis DSM 43247, complete genomeDNA-cytosine methyltransferase2e-52206
NC_008942:1198000:1207929120792912089871059Methanocorpusculum labreanum Z, complete genomehypothetical protein5e-50198
NC_010814:243384:2753502753502764771128Geobacter lovleyi SZ, complete genomeDNA-cytosine methyltransferase6e-45181
NC_015160:1491258:1494121149412114952001080Odoribacter splanchnicus DSM 20712 chromosome, complete genomeDNA-cytosine methyltransferase4e-41169
NC_015160:1467445:1494121149412114952001080Odoribacter splanchnicus DSM 20712 chromosome, complete genomeDNA-cytosine methyltransferase4e-41169
NC_011831:1693935:1703816170381617049041089Chloroflexus aggregans DSM 9485, complete genomeDNA-cytosine methyltransferase1e-38160
NC_011059:2478075:2491044249104424920661023Prosthecochloris aestuarii DSM 271, complete genomeDNA-cytosine methyltransferase4e-37155
NC_003911:1078949:1096391109639110975121122Silicibacter pomeroyi DSS-3, complete genomeDNA methylase, C-5 cytosine-specific family6e-31135
NC_015259:1803266:1811981181198118132371257Polymorphum gilvum SL003B-26A1 chromosome, complete genomeDNA methylase, C-5 cytosine-specific family4e-27122
NC_008278:744777:7534787534787546831206Frankia alni ACN14a, complete genomeputative DNA Modification methylase (Cytosine-specific methyltransferase)5e-26119
NC_002937:1764117:1812266181226618133751110Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeC-5 cytosine-specific DNA methylase family protein1e-25117
NC_013854:1686997:1693424169342416945511128Azospirillum sp. B510, complete genomeDNA (cytosine-5-)-methyltransferase2e-25116
NC_019673:1275627:1279907127990712810041098Saccharothrix espanaensis DSM 44229 complete genomeDNA-cytosine methyltransferase5e-24112
NC_014923:2888723:2898666289866628997721107Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeDNA-cytosine methyltransferase7e-24111
NC_016048:3947663:3961360396136039625951236Oscillibacter valericigenes Sjm18-20, complete genomeputative methyltransferase1e-23110
NC_009485:1222697:1232538123253812336831146Bradyrhizobium sp. BTAi1 chromosome, complete genome5-methylcytosine methyltransferase1e-23110
NC_009073:529148:544028544028544969942Pyrobaculum calidifontis JCM 11548, complete genomeDNA-cytosine methyltransferase7e-23108
NC_010694:1052722:1077062107706210782491188Erwinia tasmaniensis, complete genomeC-5 cytosine-specific DNA methylase family protein7e-23108
NC_016901:414670:4244004244004255571158Shewanella baltica OS678 chromosome, complete genomeDNA-cytosine methyltransferase2e-22107
NC_009997:415808:4255384255384266951158Shewanella baltica OS195, complete genomeDNA-cytosine methyltransferase2e-22107
NC_016885:237682:252994252994253950957Pyrobaculum oguniense TE7 chromosome, complete genomeDNA-methyltransferase (dcm)2e-22107
NC_012856:207194:2167282167282179241197Ralstonia pickettii 12D chromosome 1, complete genomeDNA-cytosine methyltransferase7e-22105
NC_016947:2210339:2227999222799922300082010Mycobacterium intracellulare MOTT-02 chromosome, complete genomeDNA-cytosine methyltransferase6e-22105
NC_013093:1157476:1167448116744811685331086Actinosynnema mirum DSM 43827, complete genomeDNA-cytosine methyltransferase5e-22105
NC_013173:953633:9741029741029752951194Desulfomicrobium baculatum DSM 4028, complete genomeC-5 cytosine-specific DNA methylase1e-21103
NC_009380:636000:6385536385536405111959Salinispora tropica CNB-440 chromosome, complete genomeDNA-cytosine methyltransferase1e-21103
NC_009376:1633283:164543816454381646394957Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeDNA-cytosine methyltransferase1e-21103
NC_010525:612000:627123627123628085963Thermoproteus neutrophilus V24Sta, complete genomeDNA-cytosine methyltransferase2e-20100
NC_010296:54000:558005580056585786Microcystis aeruginosa NIES-843, complete genomecytosine specific DNA methyltransferase6e-2098.6
NC_016645:20199:365643656437514951Pyrobaculum sp. 1860 chromosome, complete genomeC-5 cytosine-specific DNA methylase1e-1997.4
NC_016906:181254:2041062041062052331128Gordonia polyisoprenivorans VH2 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase1e-1997.4
NC_015634:2547144:2557816255781625591561341Bacillus coagulans 2-6 chromosome, complete genomeModification methylase1e-1997.4
NC_015846:24771:3549435494365701077Capnocytophaga canimorsus Cc5 chromosome, complete genomeMHphi(C)4e-1995.9
NC_014391:1812500:1836615183661518377211107Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeDNA-cytosine methyltransferase6e-1995.1
NC_009802:352641:3595633595633607291167Campylobacter concisus 13826, complete genomemodification methylase HaeIII (Cytosine-specificmethyltransferase HaeIII; M.HaeIII)1e-1894.4
NC_000964:649781:6547716547716560541284Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-1894
NC_008702:815264:8247548247548260581305Azoarcus sp. BH72, complete genomeprobable C-5 cytosine-specific DNA methylase4e-1892.4
NC_014560:171931:1815611815611828051245Helicobacter pylori SJM180 chromosome, complete genomeDNA-cytosine methyltransferase1e-1791.3
NC_009077:874164:8840408840408850891050Mycobacterium sp. JLS, complete genomeDNA-cytosine methyltransferase1e-1790.9
NC_008554:1623041:1635995163599516372841290Syntrophobacter fumaroxidans MPOB, complete genomeDNA-cytosine methyltransferase4e-1789.4
NC_014393:4775452:4832935483293548340261092Clostridium cellulovorans 743B chromosome, complete genomeDNA-cytosine methyltransferase2e-1687.4
NC_019792:153661:1747091747091759201212Natronobacterium gregoryi SP2 chromosome, complete genomeDNA-methyltransferase Dcm2e-1686.7
NC_016048:4047922:4055599405559940567531155Oscillibacter valericigenes Sjm18-20, complete genomecytosine-specific methyltransferase3e-1686.3
NC_016943:3352413:3374491337449133755851095Blastococcus saxobsidens DD2, complete genomecytosine-specific methyltransferase3e-1686.3
NC_020995:3300751:3309845330984533109871143Enterococcus casseliflavus EC20, complete genomeDNA (cytosine-5-)-methyltransferase3e-1686.3
NC_013971:73037:9028790287914051119Erwinia amylovora ATCC 49946 chromosome, complete genomecytosine-specific DNA methylase4e-1685.9
NC_013961:73037:9026690266914051140Erwinia amylovora, complete genomemodification methylase5e-1685.5
NC_015671:3211972:3242965324296532440471083Cellvibrio gilvus ATCC 13127 chromosome, complete genomeDNA-cytosine methyltransferase5e-1685.5
NC_014307:1:90759075103911317Ralstonia solanacearum CFBP2957 chromosome, complete genomecytosine-specific methyltransferase1e-1584.3
NC_008817:387408:3937773937773958462070Prochlorococcus marinus str. MIT 9515, complete genomeDNA-cytosine methyltransferase1e-1584
NC_013410:1152188:1159106115910611603621257Fibrobacter succinogenes subsp. succinogenes S85 chromosome,DNA-cytosine methyltransferase3e-1583.2
NC_016582:7033000:7043569704356970455631995Streptomyces bingchenggensis BCW-1 chromosome, complete genomeDNA-cytosine methyltransferase4e-1582.8
NC_009663:2531876:2534545253454525356331089Sulfurovum sp. NBC37-1, complete genomecytosine-specific methyltransferase7e-1581.6
NC_014393:4775452:4831715483171548329351221Clostridium cellulovorans 743B chromosome, complete genomeDNA-cytosine methyltransferase9e-1581.6
NC_008816:369074:3737513737513758472097Prochlorococcus marinus str. AS9601, complete genomeDNA-cytosine methyltransferase1e-1480.9
NC_007577:353755:3584683584683605282061Prochlorococcus marinus str. MIT 9312, complete genomeDNA-cytosine methyltransferase1e-1480.9
NC_013757:780835:8019758019758039902016Geodermatophilus obscurus DSM 43160, complete genomeDNA-cytosine methyltransferase2e-1480.5
NC_016111:3052494:3071940307194030736401701Streptomyces cattleya NRRL 8057, complete genomeDNA-methyltransferase Dcm2e-1480.1
NC_013131:9903320:9910962991096299121311170Catenulispora acidiphila DSM 44928, complete genomeDNA-cytosine methyltransferase3e-1479.7
NC_009840:396319:4000224000224021182097Prochlorococcus marinus str. MIT 9215, complete genomeSite-specific DNA methylase4e-1479.3
NC_015510:3273308:3288809328880932900711263Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeDNA-cytosine methyltransferase5e-1479
NC_016943:3352413:3371695337169533728101116Blastococcus saxobsidens DD2, complete genomeDNA-methyltransferase Dcm5e-1479
NC_008818:1127575:114761511476151148574960Hyperthermus butylicus DSM 5456, complete genomeSite-specific DNA methylase1e-1377.8
NC_015913:1248000:1266402126640212676401239Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomecytosine-specific methyltransferase1e-1377.4
NC_014759:2099623:2113790211379021150281239Marivirga tractuosa DSM 4126 chromosome, complete genomeDNA-cytosine methyltransferase3e-1376.3
NC_008148:2231045:2242005224200522432221218Rubrobacter xylanophilus DSM 9941, complete genomeDNA (cytosine-5-)-methyltransferase4e-1375.9
NC_004663:6223442:6237974623797462391821209Bacteroides thetaiotaomicron VPI-5482, complete genomeputative cytosine-specific methyltransferase1e-1274.3
NC_009715:1829978:1859706185970618607641059Campylobacter curvus 525.92 chromosome, complete genomecytosine-specific methyltransferase NlaX2e-1273.9
NC_003413:37233:565545655457459906Pyrococcus furiosus DSM 3638, complete genomecytosine-specific DNA-methyltransferase3e-1272.8
NC_010125:3854957:3859994385999438613011308Gluconacetobacter diazotrophicus PAl 5, complete genomeputative cytosine-specifi methyltransferase DdeI7e-1271.6
NC_016109:3963189:3983220398322039852502031Kitasatospora setae KM-6054, complete genomeputative DNA methyltransferase9e-1271.6
NC_008253:3941938:395092439509243951841918Escherichia coli 536, complete genomeputative type II 5-cytosoine methyltransferase1e-1171.2
NC_010511:1641416:1657710165771016589811272Methylobacterium sp. 4-46 chromosome, complete genomeDNA-cytosine methyltransferase9e-1271.2
NC_013956:3525711:353540635354063536347942Pantoea ananatis LMG 20103 chromosome, complete genomeHsdRM1e-1067.8
NC_013407:333387:348517348517349449933Methanocaldococcus vulcanius M7, complete genomeDNA-cytosine methyltransferase2e-1067
NC_003450:1871377:1878333187833318794031071Corynebacterium glutamicum ATCC 13032, complete genomesite-specific DNA methylase or3e-1066.6
NC_006958:1872849:1879784187978418808751092Corynebacterium glutamicum ATCC 13032, complete genomeMODIFICATION METHYLASE3e-1066.2
NC_003112:744476:7557327557327567901059Neisseria meningitidis MC58, complete genomemodification methylase HgaI-15e-1065.9
NC_017505:751836:7596347596347606921059Neisseria meningitidis alpha710 chromosome, complete genomemodification methylase HgaI-15e-1065.9
NC_017515:1527461:1536600153660015376581059Neisseria meningitidis M04-240196 chromosome, complete genomeDNA-cytosine methyltransferase5e-1065.9
NC_017516:1535904:1548500154850015495581059Neisseria meningitidis H44/76 chromosome, complete genomeDNA-cytosine methyltransferase5e-1065.9
NC_017518:828662:8333518333518344091059Neisseria meningitidis NZ-05/33 chromosome, complete genomeDNA-cytosine methyltransferase5e-1065.9
NC_017514:1491235:1500374150037415014291056Neisseria meningitidis M01-240149 chromosome, complete genomeDNA-cytosine methyltransferase5e-1065.9
NC_014924:1762995:1772973177297317743041332Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeDNA-cytosine methyltransferase4e-1065.9
NC_009848:720510:7348807348807365261647Bacillus pumilus SAFR-032, complete genomeDNA (cytosine-5-)-methyltransferase6e-1065.5
NC_016510:1749967:1749967174996717511841218Flavobacterium columnare ATCC 49512 chromosome, complete genomecytosine-specific methyltransferase8e-1065.1
NC_013132:782846:7838817838817850531173Chitinophaga pinensis DSM 2588, complete genomeDNA-cytosine methyltransferase8e-1064.7
NC_008726:1142500:1158197115819711593571161Mycobacterium vanbaalenii PYR-1, complete genomeDNA-cytosine methyltransferase9e-1064.7
NC_010511:1641416:1643663164366316449671305Methylobacterium sp. 4-46 chromosome, complete genomeDNA-cytosine methyltransferase1e-0964.7
NC_014958:923646:934284934284935264981Deinococcus maricopensis DSM 21211 chromosome, complete genomeDNA-cytosine methyltransferase2e-0963.9
NC_016641:2587000:2592336259233625940451710Paenibacillus terrae HPL-003 chromosome, complete genomeDNA-cytosine methyltransferase2e-0963.9
NC_008699:2418722:2433741243374124349401200Nocardioides sp. JS614, complete genomeDNA-cytosine methyltransferase2e-0963.9
NC_018750:6070260:6086186608618660874661281Streptomyces venezuelae ATCC 10712, complete genomeDNA methylase3e-0963.2
NC_015945:218326:2265942265942278291236Muricauda ruestringensis DSM 13258 chromosome, complete genomeDNA-cytosine methyltransferase3e-0963.2
NC_011741:4570498:4577258457725845783971140Escherichia coli IAI1 chromosome, complete genomeputative modification methylase NmeDIP2e-0860.5
CU928160:4570498:4577258457725845783971140Escherichia coli IAI1 chromosome, complete genomeputative modification methylase NmeDIP2e-0860.5
NC_014935:1165276:1189649118964911908331185Nitratifractor saLSUginis DSM 16511 chromosome, complete genomeDNA-cytosine methyltransferase3e-0859.7
NC_014762:2428721:243803624380362439034999Sulfuricurvum kujiense DSM 16994 chromosome, complete genomeDNA-cytosine methyltransferase4e-0859.3
NC_008529:1042220:1047502104750210486441143Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeSite-specific DNA methylase5e-0858.9
NC_013202:418500:4304204304204317781359Halomicrobium mukohataei DSM 12286, complete genomeDNA-cytosine methyltransferase8e-0858.2
NC_013929:2536255:2549845254984525510471203Streptomyces scabiei 87.22 chromosome, complete genomemodification methylase9e-0858.2
NC_013164:67500:816078160782572966Anaerococcus prevotii DSM 20548 plasmid pAPRE01, complete sequenceDNA-cytosine methyltransferase1e-0757.8
NC_006138:2288261:2313536231353623146181083Desulfotalea psychrophila LSv54, complete genomemodification methylase2e-0757.4
NC_013929:3722867:3741054374105437423281275Streptomyces scabiei 87.22 chromosome, complete genomerestriction/modification system DNA methylase2e-0757
NC_003888:7561923:7617112761711276183831272Streptomyces coelicolor A3(2), complete genomeDNA methylase5e-0755.8
NC_019897:3810000:3851696385169638528081113Thermobacillus composti KWC4 chromosome, complete genomeDNA-methyltransferase Dcm9e-0754.7
NC_015850:1242010:1259717125971712608741158Acidithiobacillus caldus SM-1 chromosome, complete genomeDNA-cytosine methyltransferase1e-0654.7
NC_014836:1551965:158589615858961586816921Desulfurispirillum indicum S5 chromosome, complete genomeDNA-cytosine methyltransferase1e-0654.3
NC_008095:4189082:4193685419368541952021518Myxococcus xanthus DK 1622, complete genomeDNA-cytosine methyltransferase1e-0654.3
NC_021150:3667176:3672550367255036740551506Azotobacter vinelandii CA6, complete genomeC-5 cytosine-specific DNA methylase2e-0653.9
NC_012560:3667177:3672551367255136740561506Azotobacter vinelandii DJ, complete genomeC-5 cytosine-specific DNA methylase2e-0653.9
NC_015147:9761:97619761109301170Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completeDNA-methyltransferase Dcm2e-0653.9
NC_013412:33834:1045210452115641113Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequenceDNA-cytosine methyltransferase2e-0653.9
NC_011989:2262881:2277962227796222794401479Agrobacterium vitis S4 chromosome 1, complete sequenceDNA methylase3e-0652.8
NC_013522:991649:1006717100671710077691053Thermanaerovibrio acidaminovorans DSM 6589, complete genomeDNA-cytosine methyltransferase6e-0652