Pre_GI: BLASTP Hits

Some Help

Query: NC_010501:5735656:5750541 Pseudomonas putida W619, complete genome

Start: 5750541, End: 5752712, Length: 2172

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:5955467:5969934596993459721022169Pseudomonas putida S16 chromosome, complete genomeTn7-like transposition protein B01153
NC_007492:6372900:6414895641489564170662172Pseudomonas fluorescens PfO-1, complete genomeTn7-like transposition protein B2e-114413
NC_013921:1915377:1924090192409019262522163Thermoanaerobacter italicus Ab9 chromosome, complete genomeIntegrase catalytic region2e-85317
NC_014394:1325616:1328977132897713311422166Gallionella capsiferriformans ES-2 chromosome, complete genomeIntegrase catalytic region1e-82308
NC_014657:2127500:2136058213605821382202163Caldicellulosiruptor owensensis OL chromosome, complete genomeintegrase catalytic region9e-83308
NC_015958:2174731:2184442218444221866042163Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit7e-83308
NC_011206:200000:2065542065542087402187Acidithiobacillus ferrooxidans ATCC 53993, complete genomeTn7-like transposition protein B8e-81301
NC_017328:3935185:3955764395576439578722109Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn7 transposition protein tnsB5e-66253
NC_007384:4095016:4101517410151741036252109Shigella sonnei Ss046, complete genomeputative transposase5e-66253
NC_014844:2721746:2729872272987227319592088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase catalytic subunit1e-63244
NC_010718:237962:2568042568042589572154Natranaerobius thermophilus JW/NM-WN-LF, complete genomeIntegrase catalytic region3e-62240
NC_015740:4508375:4518273451827345203332061Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase core domain-containing protein7e-62239
NC_006512:2789098:2812068281206828141462079Idiomarina loihiensis L2TR, complete genomeTransposon Tn7 transposition protein tnsB8e-62239
NC_010634:4463727:4485390448539044875552166Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein7e-61235
NC_015851:89006:1057801057801078552076Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein tnsB5e-59229
NC_007974:2048000:2057521205752120596982178Ralstonia metallidurans CH34 chromosome 2, complete sequencehypothetical protein4e-57223
NC_010995:4525119:4548733454873345508442112Cellvibrio japonicus Ueda107, complete genomeTn7-Cj, transposase protein TnsB3e-56220
NC_010625:1602191:1614741161474116169272187Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein3e-56220
NC_009052:5089963:5100587510058751026592073Shewanella baltica OS155, complete genomeIntegrase, catalytic region8e-54212
NC_011748:3983432:3998093399809340002162124Escherichia coli 55989, complete genomeTn7-like transposition protein TnsB8e-54212
CU928145:3983432:3998093399809340002162124Escherichia coli 55989 chromosome, complete genomeTn7-like transposition protein TnsB8e-54212
NC_009838:81913:1099931099931121162124Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTnsB8e-54212
NC_014121:5000069:5014584501458450166622079Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeTn7-like transposition protein TnsB5e-53209
NC_015572:4916430:4936848493684849389292082Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit2e-52207
NC_009659:3815966:3836600383660038388252226Janthinobacterium sp. Marseille chromosome, complete genomeTn7-like transposition protein B2e-48194
NC_009349:3396:1164611646138292184Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTn7-like transposition protein B1e-47191
NC_015497:4564339:4570940457094045731082169Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometransposon Tn7 transposition protein TnsB4e-46186
NC_014394:3114648:3124852312485231270952244Gallionella capsiferriformans ES-2 chromosome, complete genomeTn7-like transposition protein B3e-44180
NC_014118:987889:1028596102859610310222427Burkholderia sp. CCGE1002 chromosome chromosome 2, completehypothetical protein5e-37156
NC_007908:1252189:1260390126039012626362247Rhodoferax ferrireducens T118, complete genomehypothetical protein4e-32140
NC_005773:5149768:5173332517333251754492118Pseudomonas syringae pv. phaseolicola 1448A, complete genometransposon Tn7-like transposase protein B4e-30133
NC_010623:2057467:2057467205746720598872421Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein9e-30132
NC_016616:1091606:1121239112123911236112373Dechlorosoma suillum PS chromosome, complete genomehypothetical protein4e-24114
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit7e-1893.2
NC_014366:3555425:3567950356795035698481899Gamma proteobacterium HdN1, complete genomeIntegrase, catalytic region2e-1688.6
NC_015572:1:1358813588155761989Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit2e-1585.1
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region2e-1585.1
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein5e-1583.6
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase8e-1479.3
NC_015161:1748236:1755388175538817573311944Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein4e-1377
NC_010501:1:80668066100241959Pseudomonas putida W619, complete genomeIntegrase catalytic region9e-1376.3
NC_009512:1:80468046100041959Pseudomonas putida F1, complete genomeIntegrase, catalytic region9e-1376.3
NC_010322:1:88288828107861959Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit9e-1376.3
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA9e-1376.3
NC_002947:8394:1713317133191662034Pseudomonas putida KT2440, complete genometransposase, putative8e-1376.3
NC_007509:3668:2569725697276461950Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein1e-1275.9
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase1e-1275.9
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein2e-1275.1
NC_009997:2635025:2654472265447226564061935Shewanella baltica OS195, complete genomeIntegrase catalytic region3e-1274.3
NC_016901:2594942:2614389261438926163231935Shewanella baltica OS678 chromosome, complete genomeintegrase catalytic subunit3e-1274.3
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA6e-1273.2
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein7e-1273.2
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-1170.9
NC_007520:407627:4259384259384278481911Thiomicrospira crunogena XCL-2, complete genomeIntegrase, catalytic region5e-1170.5
NC_014539:1:1839118391203521962Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase catalytic subunit5e-1170.1
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit1e-1069.3
NC_008577:4611431:4638394463839446402471854Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region1e-1068.9
NC_015572:1:4276342763446431881Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit6e-1066.6
NC_017986:5833819:5844511584451158462291719Pseudomonas putida ND6 chromosome, complete genomeintegrase catalytic subunit1e-0965.9
NC_009659:3384997:3399629339962934014611833Janthinobacterium sp. Marseille chromosome, complete genometransposase1e-0965.5
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit2e-0965.1
NC_003384:157158:1693331693331706191287Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid2e-0964.7
NC_013365:92973:1039281039281051961269Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTniA protein2e-0964.7
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase3e-0964.7
NC_004578:20738:3397833978359331956Pseudomonas syringae pv. tomato str. DC3000, complete genometransposase8e-0962.8
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase1e-0862
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein5e-0860.5
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B6e-0860.1
NC_009778:4188000:419723641972364198216981Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-0758.5
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region3e-0757.8
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase5e-0757
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein8e-0756.2
NC_007413:1405817:1407584140758414092661683Anabaena variabilis ATCC 29413, complete genomeIntegrase, catalytic region2e-0655.1
NC_007951:4576825:4582707458270745849592253Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein3e-0654.7
NC_012988:2507142:2508022250802225096801659Methylobacterium extorquens DM4, complete genometransposase of ISMdi29, ISNCY family5e-0653.5
NC_010682:1652636:1669589166958916715111923Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein7e-0653.1