Pre_GI: BLASTP Hits

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Query: NC_010407:3174470:3193095 Clavibacter michiganensis subsp. sepedonicus chromosome, complete

Start: 3193095, End: 3194414, Length: 1320

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019673:2733327:2738550273855027398181269Saccharothrix espanaensis DSM 44229 complete genomeABC-type transporter, substrate-binding lipoprotein, family 15e-71268
NC_011886:404661:4213504213504226421293Arthrobacter chlorophenolicus A6, complete genomeextracellular solute-binding protein family 11e-68260
NC_013929:8525000:8537128853712885384021275Streptomyces scabiei 87.22 chromosome, complete genomesubstrate-binding transporter2e-65250
NC_013521:940495:9554699554699567851317Sanguibacter keddieii DSM 10542, complete genomecarbohydrate-binding protein9e-61234
NC_009480:99640:1270431270431283201278Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative sugar ABC transporter, binding protein2e-60233
NC_016582:8243727:8250390825039082516911302Streptomyces bingchenggensis BCW-1 chromosome, complete genomesugar binding secreted protein7e-59228
NC_009142:6086000:6103567610356761048261260Saccharopolyspora erythraea NRRL 2338, complete genomeputative sugar binding secreted protein4e-55215
NC_016582:1751988:1764160176416017654761317Streptomyces bingchenggensis BCW-1 chromosome, complete genomesolute binding lipoprotein2e-49197
NC_013929:257635:2629282629282642051278Streptomyces scabiei 87.22 chromosome, complete genomesolute binding lipoprotein3e-48192
NC_011567:2327870:2334876233487623362251350Anoxybacillus flavithermus WK1, complete genomeABC-type sugar transport system, periplasmic component2e-45183
NC_014829:3741843:3753994375399437552951302Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeextracellular solute-binding protein family 12e-34147
NC_013947:6585847:6625447662544766267481302Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeextracellular solute-binding protein family 19e-33141
NC_017221:2268276:2284399228439922855711173Bifidobacterium longum subsp. longum KACC 91563 chromosome,ABC transporter substrate-binding protein4e-1273.2
NC_015671:874500:8980898980898994231335Cellvibrio gilvus ATCC 13127 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1068.6
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein4e-1066.6
NC_015732:773143:7933897933897946871299Spirochaeta caldaria DSM 7334 chromosome, complete genomeextracellular solute-binding protein family 14e-1066.6
NC_013421:1038500:1042630104263010438951266Pectobacterium wasabiae WPP163, complete genomeextracellular solute-binding protein family 13e-1066.6
NC_012917:833721:8569088569088581731266Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeextracellular solute-binding protein family 14e-1066.2
NC_015052:2383865:2388169238816923895091341Bifidobacterium longum subsp. infantis 157F, complete genomeABC transporter substrate-binding protein8e-1065.5
NC_004547:913553:9385309385309397951266Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative sugar ABC transporter, periplasmic binding protein2e-0963.9
NC_015577:1462874:1468358146835814696891332Treponema azotonutricium ZAS-9 chromosome, complete genomeputative family 1 extracellular solute-binding protein4e-0963.2
NC_016582:7946000:7952288795228879535861299Streptomyces bingchenggensis BCW-1 chromosome, complete genomeMalE-type ABC sugar transport system periplasmic component5e-0962.8
NC_013093:2132284:2140041214004121413601320Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 19e-0962
NC_014206:1694330:1714328171432817156381311Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-0860.5
NC_006322:2886404:2908934290893429102381305Bacillus licheniformis ATCC 14580, complete genomeAraN2e-0860.5
NC_019973:2417000:2430787243078724320581272Mesorhizobium australicum WSM2073, complete genomeABC-type sugar transport system, periplasmic component9e-0755.1
NC_015675:2567000:2580950258095025822211272Mesorhizobium opportunistum WSM2075 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-0652.8
NC_017080:575000:5966045966045980911488Phycisphaera mikurensis NBRC 102666, complete genomeputative ABC transporter substrate binding protein9e-0652