Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:8525000 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
852511185280082898hypothetical proteinBLASTP
85280888528834747oxidoreductaseQuickGO ontologyBLASTP
852882885304411614hypothetical proteinBLASTP
853064285330922451beta-xylosidaseQuickGO ontologyBLASTP
853310385349381836glycosyl hydrolaseQuickGO ontologyBLASTP
85350668535887822ABC transporterQuickGO ontologyBLASTP
85359778536963987ABC transporterQuickGO ontologyBLASTP
853712885384021275substrate-binding transporterQuickGO ontologyBLASTP
85386718539318648hypothetical proteinBLASTP
85394568539695240hypothetical protein
85397518540662912hypothetical proteinBLASTP
854119485425971404glycosyl hydrolaseQuickGO ontologyBLASTP