Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:1:13791 Pseudomonas putida GB-1 chromosome, complete genome

Start: 13791, End: 14150, Length: 360

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:8394:221712217122530360Pseudomonas putida KT2440, complete genometranscriptional regulator MvaT, P16 subunit, putative5e-54209
NC_010501:1:130291302913388360Pseudomonas putida W619, complete genomehypothetical protein5e-54209
NC_009512:1:130091300913368360Pseudomonas putida F1, complete genomehypothetical protein5e-54209
NC_017986:2548720:256318225631822563541360Pseudomonas putida ND6 chromosome, complete genomehypothetical protein8e-43172
NC_004578:5336773:539211053921105392484375Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein6e-35145
NC_004129:5723787:573708157370815737446366Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, putative2e-34144
NC_009512:5632591:566469356646935665058366Pseudomonas putida F1, complete genomehypothetical protein7e-33139
NC_010501:2609567:261731026173102617672363Pseudomonas putida W619, complete genomehypothetical protein1e-32138
NC_010322:4623867:466125746612574661616360Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein9e-33138
NC_015733:2581324:262707926270792627444366Pseudomonas putida S16 chromosome, complete genomeputative transcriptional regulator7e-32135
NC_017986:409899:416032416032416397366Pseudomonas putida ND6 chromosome, complete genomeputative transcriptional regulator1e-31135
NC_010501:3671517:367858236785823678947366Pseudomonas putida W619, complete genometranscriptional regulator, putative2e-31134
NC_012660:2684981:270792827079282708293366Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-31133
NC_015733:3736104:375875237587523759120369Pseudomonas putida S16 chromosome, complete genomeputative transcriptional regulator, MvaT P16 subunit1e-30131
NC_007492:3180480:322030332203033220668366Pseudomonas fluorescens PfO-1, complete genomehypothetical protein2e-30130
NC_009512:3334579:334174433417443342109366Pseudomonas putida F1, complete genomehypothetical protein3e-30130
NC_005773:5734733:573518057351805735545366Pseudomonas syringae pv. phaseolicola 1448A, complete genomeH-NS6e-30129
NC_002947:4167500:421112242111224211487366Pseudomonas putida KT2440, complete genometranscriptional regulator MvaT, P16 subunit, putative3e-29126
NC_009512:2238437:225927122592712259675405Pseudomonas putida F1, complete genomehypothetical protein5e-29125
NC_002947:4293252:429572042957204296079360Pseudomonas putida KT2440, complete genometranscriptional regulator MvaT, P16 subunit, putative6e-29125
NC_020829:4390417:439699443969944397356363Pseudomonas denitrificans ATCC 13867, complete genomeputative regulatory protein2e-28124
NC_010322:5349000:536312153631215363489369Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein3e-28123
NC_020829:2754203:277985927798592780224366Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator MvaV3e-28123
NC_017986:4790482:482832948283294828694366Pseudomonas putida ND6 chromosome, complete genomeputative transcriptional regulator, MvaT P16 subunit8e-28122
NC_009512:2782000:279153327915332791895363Pseudomonas putida F1, complete genomehypothetical protein8e-27119
NC_015556:2265940:233217623321762332535360Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein1e-26118
NC_010322:1817598:184684618468461847262417Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein9e-27118
NC_017986:5867782:588452158845215884883363Pseudomonas putida ND6 chromosome, complete genomehypothetical protein6e-26115
NC_009434:3611738:362487136248713625155285Pseudomonas stutzeri A1501, complete genometranscriptional regulator MvaT, P16 subunit, putative2e-2097.8
NC_008740:2905990:293346529334652933833369Marinobacter aquaeolei VT8, complete genometranscriptional regulator MvaT, P16 subunit8e-1889
NC_017506:2504746:250800425080042508372369Marinobacter adhaerens HP15 chromosome, complete genometranscriptional regulator MvaT, P16 subunit1e-1788.6
NC_007645:605500:612969612969613331363Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-1684.3
NC_007645:2408125:243182524318252432172348Hahella chejuensis KCTC 2396, complete genomehypothetical protein2e-1477.4