Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1153810 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1153810, End: 1154271, Length: 462

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011094:638552:6676816676816698102130Salmonella enterica subsp. enterica serovar Schwarzengrund strphage terminase large subunit2e-69260
NC_011094:1923870:194167519416751942049375Salmonella enterica subsp. enterica serovar Schwarzengrund str1e-67254
NC_011205:1345511:1373433137343313755742142Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phage terminase large subunit2e-60230
NC_016831:1734292:1738044173804417400772034Salmonella enterica subsp. enterica serovar Gallinarum/pullorumLarge Subunit of Terminase3e-60229
NC_013008:2910567:2910567291056729125792013Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA packaging protein of prophage CP-933U1e-59228
NC_011353:1761977:1759857175985717619802124Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage terminase large subunit8e-60228
NC_011353:2957962:2955842295584229579652124Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage terminase large subunit8e-60228
NC_002695:2893951:2916087291608729182102124Escherichia coli O157:H7 str. Sakai, complete genomeputative terminase large subunit7e-60228
NC_011353:2892265:2910272291027229123952124Escherichia coli O157:H7 str. EC4115 chromosome, complete genomephage terminase large subunit7e-60228
NC_007712:2028500:2077831207783120791981368Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-59226
NC_011740:2769961:2771693277169327738102118Escherichia fergusonii ATCC 35469, complete genomeputative DNA packaging protein of prophage ( terminase large subunit)4e-58223
NC_013361:2138716:2142405214240521445042100Escherichia coli O26:H11 str. 11368 chromosome, complete genometerminase large subunit1e-57221
NC_014121:1682638:1701160170116017032622103Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage terminase large subunit6e-57219
NC_017047:1906000:1921137192113719232392103Rahnella aquatilis HX2 chromosome, complete genometerminase GpA7e-56215
NC_017060:59500:8850288502906162115Rahnella aquatilis HX2 plasmid PRA1, complete sequenceterminase GpA1e-55214
NC_011740:4520373:4532433453243345345352103Escherichia fergusonii ATCC 35469, complete genomeputative DNA packaging protein of putative prophage ( terminase large subunit)7e-55212
NC_011748:1773642:1777741177774117798432103Escherichia coli 55989, complete genomeputative DNA packaging protein of putative prophage ( terminase large subunit)8e-55212
CU928145:1773642:1777741177774117798432103Escherichia coli 55989 chromosome, complete genomeputative DNA packaging protein of putative prophage ( terminase large subunit)8e-55212
NC_011742:4962008:4974965497496549770672103Escherichia coli S88 chromosome, complete genomeDNA packaging protein of prophage ( terminase large subunit)8e-55212
NC_011751:1859606:1863295186329518653972103Escherichia coli UMN026 chromosome, complete genomeputative DNA packaging protein8e-55212
NC_008563:5011997:5024955502495550270572103Escherichia coli APEC O1, complete genomeputative DNA packaging protein of prophage CP-933K8e-55212
NC_009053:553298:5757075757075778242118Actinobacillus pleuropneumoniae L20, complete genomepredicted bacteriophage tail assembly protein9e-54208
NC_016612:3314846:3340032334003233421402109Klebsiella oxytoca KCTC 1686 chromosome, complete genomephage terminase large subunit2e-53207
NC_010002:3753000:3760973376097337632192247Delftia acidovorans SPH-1, complete genometerminase GpA2e-32138
NC_014632:1112733:1134686113468611364971812Ilyobacter polytropus DSM 2926 chromosome, complete genometerminase GpA4e-0960.5
NC_009659:3103601:3107482310748231094431962Janthinobacterium sp. Marseille chromosome, complete genomephage terminase, large subunit4e-0753.5
NC_011894:2549076:2549076254907625511482073Methylobacterium nodulans ORS 2060, complete genometerminase GpA3e-0651.2
NC_011958:976500:1010709101070910126671959Rhodobacter sphaeroides KD131 chromosome 2, complete genomeBacteriophage tail assembly protein9e-0649.3