Pre_GI: BLASTP Hits

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Query: NC_010067:660659:679844 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 679844, End: 680128, Length: 285

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:2324293:232617823261782326462285Salmonella enterica subsp. enterica serovar Typhimurium str. UK-150S ribosomal protein L252e-48190
NC_011147:682897:704349704349704633285Salmonella enterica subsp. enterica serovar Paratyphi A str50S ribosomal protein L252e-48190
NC_010102:683444:719092719092719376285Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-48190
NC_006511:682863:704403704403704687285Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC50S ribosomal protein L252e-48190
NC_015566:3622385:362430436243043624588285Serratia sp. AS12 chromosome, complete genome50S ribosomal protein L251e-40164
NC_013961:2370994:237376823737682374052285Erwinia amylovora, complete genome50S ribosomal protein L257e-40162
NC_013971:2408522:241129624112962411580285Erwinia amylovora ATCC 49946 chromosome, complete genome50S ribosomal protein L257e-40162
NC_020064:3157656:316055131605513160835285Serratia marcescens FGI94, complete genomeribosomal protein L25 (general stress protein Ctc)1e-39161
NC_016816:1545354:157642915764291576713285Pantoea ananatis LMG 5342, complete genome50S ribosomal protein L251e-39161
NC_014618:1593360:160859116085911608875285Enterobacter cloacae SCF1 chromosome, complete genome50S ribosomal protein L252e-39160
NC_012917:1840172:188436018843601884644285Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeribosomal protein L255e-36149
NC_009053:553298:556776556776557063288Actinobacillus pleuropneumoniae L20, complete genome50S ribosomal protein L253e-27120
NC_017256:144854:144854144854145138285Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,50S ribosomal protein L255e-24109
NC_010170:4196197:422510142251014225724624Bordetella petrii, complete genome50S ribosomal protein L256e-2199.4
NC_002927:960369:962550962550963164615Bordetella bronchiseptica RB50, complete genome50S ribosomal protein L253e-1993.6
NC_017223:3345902:336891933689193369545627Bordetella pertussis CS chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc7e-1992.4
NC_002929:3305682:332869933286993329325627Bordetella pertussis Tohama I, complete genome50S ribosomal protein L257e-1992.4
NC_015731:3658956:366175736617573662380624Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L252e-1787.8
NC_010645:558974:560020560020560616597Bordetella avium 197N, complete genome50S ribosomal protein L25/general stress protein Ctc4e-1786.7
NC_004545:141478:142440142440142733294Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome50S ribosomal protein L256e-1786.3
NC_010995:764567:781312781312781923612Cellvibrio japonicus Ueda107, complete genomeribosomal protein L25, Ctc-form1e-1684.7
NC_017033:678321:679438679438680076639Frateuria aurantia DSM 6220 chromosome, complete genome50S ribosomal protein L252e-1684.3
NC_010084:534937:560996560996561601606Burkholderia multivorans ATCC 17616 chromosome 1, complete50S ribosomal protein L25/general stress protein Ctc1e-1581.6
NC_010804:2960352:296317229631722963777606Burkholderia multivorans ATCC 17616 chromosome 1, completelarge subunit ribosomal protein L251e-1581.6
NC_015572:4209000:424572442457244246338615Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L251e-1581.6
NC_016893:694587:697886697886698176291Wigglesworthia glossinidia endosymbiont of Glossina morsitans50S ribosomal protein L256e-1579.3
NC_020209:47504:108771108771109382612Pseudomonas poae RE*1-1-14, complete genome50S ribosomal protein L25/general stress protein Ctc1e-1478.6
NC_009434:3434381:343543034354303436047618Pseudomonas stutzeri A1501, complete genome50S ribosomal protein L25/general stress protein Ctc3e-1477
NC_004578:1190000:121776012177601218371612Pseudomonas syringae pv. tomato str. DC3000, complete genome50S ribosomal protein L257e-1475.9
NC_012660:819381:832535832535833137603Pseudomonas fluorescens SBW25 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc2e-1374.3
NC_014733:2095996:210375921037592104376618Methylovorus sp. MP688 chromosome, complete genomeribosomal 5S rRNA e-loop binding protein ctc/l25/tl55e-1373.2
NC_012969:2136243:214182921418292142446618Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL55e-1373.2
NC_016112:3840053:388179238817923882412621Methylomicrobium alcaliphilum chromosome, complete genome50S ribosomal protein L256e-1372.8
NC_015733:864959:878238878238878831594Pseudomonas putida S16 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc7e-1372.4
NC_009656:5475540:547996554799655480579615Pseudomonas aeruginosa PA7 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc3e-1270.5
NC_015410:1202370:121752812175281218142615Pseudomonas mendocina NK-01 chromosome, complete genome50S ribosomal protein L25/general stress protein Ctc2e-1168.2
NC_014643:1577021:157897215789721579268297Rothia dentocariosa ATCC 17931 chromosome, complete genomeribosomal L25p family protein3e-1167
NC_009439:1174432:119176011917601192365606Pseudomonas mendocina ymp, complete genome50S ribosomal protein L25/general stress protein Ctc1e-1065.5
NC_012968:2000218:200232320023232002931609Methylotenera mobilis JLW8, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-1064.3
NC_014218:1663486:166348616634861664067582Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL54e-1063.2
NC_016114:4333390:433740443374044337991588Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL59e-1062.4
NC_007643:4294818:429481842948184295450633Rhodospirillum rubrum ATCC 11170, complete genomeRibosomal protein L252e-0961.6
NC_013929:6008072:601228160122816012877597Streptomyces scabiei 87.22 chromosome, complete genome50S ribosomal protein L254e-0960.1
NC_013715:1750403:176718117671811767840660Rothia mucilaginosa DY-18, complete genomeribosomal protein L252e-0857.8
NC_014654:2180994:220285322028532203533681Halanaerobium sp. 'sapolanicus' chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-0856.2
NC_009664:1195630:121492912149291215558630Kineococcus radiotolerans SRS30216, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL56e-0856.2
NC_009922:42696:489964899649571576Alkaliphilus oremlandii OhILAs, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL59e-0855.5
NC_010725:2589014:261462726146272615313687Methylobacterium populi BJ001, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-0755.1
NC_010571:2943369:294772029477202948538819Opitutus terrae PB90-1, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL55e-0753.1
NC_010814:2758902:278068427806842781268585Geobacter lovleyi SZ, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL51e-0652
NC_016111:2257166:226529822652982265885588Streptomyces cattleya NRRL 8057, complete genome50S ribosomal protein L252e-0651.6
NC_013947:1363078:137016713701671370784618Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeribosomal 5S rRNA E-loop binding protein Ctc/L25/TL52e-0651.2