Pre_GI: BLASTP Hits

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Query: NC_010067:660659:675073 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 675073, End: 675900, Length: 828

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009778:959982:968155968155969045891Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-1375.9
NC_016861:22256:314203142032313894Salmonella enterica subsp. enterica serovar Typhimurium strvirulence genes transcriptional activator1e-0963.5
NC_016818:2927500:294749129474912948354864Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetranscriptional regulator2e-0756.6
NC_014910:242845:245815245815246708894Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein1e-0654.3
NC_013961:629307:636056636056636856801Erwinia amylovora, complete genometranscriptional regulator of levansucrase2e-0653.5
NC_013971:3117000:313444531344453135245801Erwinia amylovora ATCC 49946 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_005810:754340:765018765018765929912Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator5e-0652
NC_004088:1075454:108528210852821086193912Yersinia pestis KIM, complete genomeLysR-type transcriptional regulatory protein5e-0652
NC_008150:3015000:302406730240673024978912Yersinia pestis Antiqua, complete genomeputative LysR-family transcriptional regulatory protein5e-0652
NC_003143:3583468:359238935923893593300912Yersinia pestis CO92, complete genomeputative LysR-family transcriptional regulatory protein5e-0652
NC_008149:1002453:101228110122811013192912Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein5e-0652
NC_009381:3228500:323665332366533237564912Yersinia pestis Pestoides F chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_009708:3542336:355125635512563552167912Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_017168:2158839:216866721686672169578912Yersinia pestis A1122 chromosome, complete genomeputative LysR family transcriptional regulator5e-0652
NC_017265:3375463:338472933847293385640912Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative LysR-family transcriptional regulatory protein5e-0652
NC_006155:1074298:108492010849201085831912Yersinia pseudotuberculosis IP 32953, complete genomeputative LysR-family transcriptional regulatory protein5e-0652