Pre_GI: BLASTP Hits

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Query: NC_009800:2651730:2673239 Escherichia coli HS, complete genome

Start: 2673239, End: 2673454, Length: 216

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020063:1194000:119560611956061195824219Enterobacteriaceae bacterium strain FGI 57, complete genomeProtein of unknown function (DUF1407)2e-27120
NC_014618:1295322:131197913119791312194216Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-2098.2
NC_013282:3216226:323842232384223238643222Cronobacter turicensis, complete genomeUncharacterized protein yfgJ2e-2097.8
NC_004088:1510467:151147215114721511696225Yersinia pestis KIM, complete genomehypothetical protein8e-1889
NC_003143:3191246:320836332083633208587225Yersinia pestis CO92, complete genomehypothetical protein8e-1889
NC_008149:1440371:144137614413761441600225Yersinia pestis Nepal516, complete genomehypothetical protein8e-1889
NC_010159:409500:427060427060427284225Yersinia pestis Angola, complete genomehypothetical protein8e-1889
NC_005810:3021913:303934430393443039568225Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-1889
NC_009381:2491427:250858225085822508806225Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein8e-1889
NC_017168:2535732:255282525528252553049225Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-1889
NC_017265:2940539:295886029588602959084225Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-1889
NC_010465:1427170:143003114300311430255225Yersinia pseudotuberculosis YPIII, complete genomeprotein of unknown function DUF14071e-1788.6
NC_006155:3333303:334995233499523350176225Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-1788.6
NC_010634:3250810:326741232674123267636225Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein1e-1788.6
NC_009708:1403434:140443914044391404663225Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1788.6
NC_012917:3378759:339289433928943393118225Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein5e-1166.6
NC_016602:2854107:288020828802082880432225Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein1e-0858.9