Pre_GI: BLASTP Hits

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Query: NC_009800:1657550:1671521 Escherichia coli HS, complete genome

Start: 1671521, End: 1672480, Length: 960

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (HS; serotype O9) is a human commensal that was originally isolated from a laboratory scientist at Walter Reed Army Institute of Research in 1978 (Levine, 1978). Strain HS colonizes the human gastrointestinal tract in challenge experiments, but no overt signs of disease occur. Thus, this strain represents a genomic baseline for human gastrointestinal tract colonization. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011740:2769961:277767827776782778637960Escherichia fergusonii ATCC 35469, complete genomeConserved Hypothetical protein from bacteriophage origin9e-179625
NC_011751:1405381:142612814261281427087960Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-169594
NC_012731:600518:660837660837661796960Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-136484
NC_015968:74124:772827728278241960Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein1e-131469
NC_011092:9974:9974997410933960Salmonella enterica subsp. enterica serovar Schwarzengrund strputative pathogenicity island protein2e-131468
NC_006856:95830:120981120981121940960Salmonella enterica subsp. enterica serovar Choleraesuis strputative pathogenicity island protein2e-131468
NC_011094:1435347:143809614380961439055960Salmonella enterica subsp. enterica serovar Schwarzengrund strpathogenicity island protein5e-129460
NC_004631:1325817:132859613285961329555960Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein2e-128458
NC_016832:1324820:132756913275691328528960Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-128458
NC_011294:1723852:175408617540861755045960Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein6e-128457
NC_011274:1763676:179391117939111794870960Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein6e-128457
NC_011205:1852665:188289818828981883857960Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853inner membrane protein6e-128457
NC_006511:1506915:153720915372091538168960Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-127456
NC_011147:1502096:153239015323901533349960Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-127456
NC_016831:1236786:123956212395621240521960Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein7e-128456
NC_011083:1476894:147964314796431480602960Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative pathogenicity island protein7e-128456
NC_011080:1470794:147356914735691474528960Salmonella enterica subsp. enterica serovar Newport str. SL254,putative inner membrane protein7e-128456
NC_003197:1471349:147412814741281475087960Salmonella typhimurium LT2, complete genomeputative inner membrane protein7e-128456
NC_016810:1428201:143098014309801431939960Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein7e-128456
NC_016856:1481325:148410414841041485063960Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein7e-128456
NC_016857:1428201:143098014309801431939960Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein7e-128456
NC_016860:1469066:147181514718151472774960Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein7e-128456
NC_016863:1429516:143229514322951433254960Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein7e-128456
NC_012125:2360815:239104923910492392008960Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein1e-127456
NC_006905:1509093:151187215118721512831960Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein2e-127455
NC_017046:1428272:143105114310511431932882Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein5e-115414
NC_010102:1616530:164690316469031647784882Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-115414
NC_012779:2755338:277445727744572775410954Edwardsiella ictaluri 93-146, complete genomehypothetical protein2e-89329
NC_013960:243884:2477662477662487671002Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function DUF5233e-68259
NC_008027:896000:918681918681919649969Pseudomonas entomophila L48, complete genomehypothetical protein2e-62239
NC_012881:1062629:107924210792421080210969Desulfovibrio salexigens DSM 2638, complete genomeprotein of unknown function DUF5232e-47189
NC_014408:1193239:119581011958101196745936Methanothermobacter marburgensis str. Marburg chromosome, completehypothetical protein2e-41169
NC_005791:1028500:104890110489011049869969Methanococcus maripaludis S2, complete genomehypothetical protein5e-40165
NC_015847:1119666:114194311419431142911969Methanococcus maripaludis XI chromosome, complete genomehypothetical protein1e-39163
NC_009637:302881:325078325078326046969Methanococcus maripaludis C7 chromosome, complete genomehypothetical protein2e-39163
NC_009634:411599:434199434199435167969Methanococcus vannielii SB chromosome, complete genomehypothetical protein2e-39162
NC_015224:1514747:153124015312401531716477Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-33142
NC_015732:2449900:247538624753862476375990Spirochaeta caldaria DSM 7334 chromosome, complete genomehypothetical protein3e-33142
NC_012967:707083:719894719894720403510Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein3e-32139
NC_012947:3077922:308420330842033084712510Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-32139
CP002185:794732:809771809771810280510Escherichia coli W, complete genomeconserved protein3e-32139
NC_010468:3209326:321560732156073216116510Escherichia coli ATCC 8739, complete genomeProtein of unknown function DUF17223e-32139
NC_012947:2189533:219404821940482194197150Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-24113
NC_011658:4672000:469065646906564691117462Bacillus cereus AH187 chromosome, complete genomehypothetical protein4e-1065.9
NC_011969:4613430:463104146310414631502462Bacillus cereus Q1 chromosome, complete genomehypothetical protein3e-1065.9
NC_017208:4887334:490716149071614907622462Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeputative cytoplasmic protein4e-0962.4
NC_014377:1335963:135492113549211355379459Thermosediminibacter oceani DSM 16646 chromosome, complete genomeprotein of unknown function DUF5231e-0757.8
NC_014150:2924158:293125329312532931690438Brachyspira murdochii DSM 12563 chromosome, complete genomeprotein of unknown function DUF5232e-0756.6
NC_014209:1487699:150666915066691507100432Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function DUF5239e-0651.2