Pre_GI Gene

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Host: NC_011092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011092:9974 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world.This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
997410933960putative pathogenicity island proteinQuickGO ontologyBLASTP
11079121671089RecFRecNSMC domain proteinQuickGO ontologyBLASTP
1223012934705IS26 transposaseQuickGO ontologyBLASTP
13198142711074hypothetical proteinBLASTP
1431514464150hypothetical protein
1480615045240bifunctional antitoxintranscriptional repressor RelBQuickGO ontologyBLASTP
1504515332288toxin RelEQuickGO ontologyBLASTP
1563616418783transposaseIS proteinQuickGO ontologyBLASTP
16415174371023transposase for insertion sequenceQuickGO ontologyBLASTP
18237204442208hypothetical proteinBLASTP
20447230292583EstPQuickGO ontologyBLASTP
2307523287213transposaseQuickGO ontologyBLASTP
2345024280831integrase core domain proteinQuickGO ontologyBLASTP
2430724570264transposase subfamilyQuickGO ontologyBLASTP
2499925976978integraserecombinaseQuickGO ontologyBLASTP
2637326537165IS1 protein InsBQuickGO ontologyBLASTP
27048288681821transposaseQuickGO ontologyBLASTP
2933330217885drugmetabolite transporterQuickGO ontologyBLASTP