Pre_GI: BLASTP Hits

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Query: NC_009708:915814:924077 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 924077, End: 924703, Length: 627

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-53208
NC_013592:446092:463175463175463804630Dickeya dadantii Ech586, complete genomehypothetical protein8e-37153
NC_011751:3453683:350750035075003508105606Escherichia coli UMN026 chromosome, complete genomehypothetical protein8e-33140
AP010958:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-32139
NC_013353:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-32139
NC_013716:5201097:523347852334785234047570Citrobacter rodentium ICC168, complete genomehypothetical protein9e-33139
NC_004431:3409389:348439734843973484966570Escherichia coli CFT073, complete genomehypothetical protein2e-32138
NC_012912:1053618:107241210724121073035624Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein7e-32137
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein6e-32137
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein6e-32137
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein6e-32137
AP010958:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-32137
NC_013353:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-32137
CP002797:2062006:208273220827322083301570Escherichia coli NA114, complete genomehypothetical protein3e-31134
NC_009708:915814:921173921173921802630Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein8e-31133
NC_012691:1250385:127024212702421270910669Tolumonas auensis DSM 9187, complete genomehypothetical protein1e-30132
NC_015761:299386:308796308796309416621Salmonella bongori NCTC 12419, complete genomeprophage protein4e-29127
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein8e-29127
NC_009092:1441813:145080814508081451473666Shewanella loihica PV-4, complete genometransposase2e-28125
NC_020418:116500:136581136581137168588Morganella morganii subsp. morganii KT, complete genometransposase3e-28124
NC_010634:1342393:135022813502281350812585Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein6e-28124
NC_009832:1946401:195677919567791957375597Serratia proteamaculans 568, complete genomehypothetical protein2e-26119
NC_020064:3609844:362956736295673630199633Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF3296)4e-26117
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein9e-26116
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein9e-26116
NC_015663:1869000:187942718794271879816390Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-25115
NC_011750:4390000:440299944029994403730732Escherichia coli IAI39 chromosome, complete genomehypothetical protein4e-25114
CP002797:4656327:465914946591494659889741Escherichia coli NA114, complete genomehypothetical protein2e-24112
NC_008563:3332114:334723833472383347978741Escherichia coli APEC O1, complete genomehypothetical protein4e-24111
NC_011742:3245500:326203032620303262770741Escherichia coli S88 chromosome, complete genomehypothetical protein4e-24111
CP002185:4750571:477035247703524770966615Escherichia coli W, complete genomehypothetical protein4e-24111
CP002516:4236680:424190342419034242517615Escherichia coli KO11, complete genomehypothetical protein4e-24111
NC_016902:4236680:424190342419034242517615Escherichia coli KO11FL chromosome, complete genomehypothetical protein4e-24111
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein3e-24111
NC_020181:5130513:514061751406175141201585Enterobacter aerogenes EA1509E, complete genomeFIG00947185: hypothetical protein2e-23109
NC_004431:4319152:433086843308684331599732Escherichia coli CFT073, complete genomehypothetical protein2e-23108
NC_011745:3405520:341584334158433416574732Escherichia coli ED1a chromosome, complete genomehypothetical protein5e-23107
NC_008563:4707826:471722247172224717953732Escherichia coli APEC O1, complete genomehypothetical protein5e-23107
NC_011083:4547825:457460345746034575334732Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein3e-22105
NC_009901:1516340:152731215273121527938627Shewanella pealeana ATCC 700345, complete genometransposase6e-22103
NC_007946:4875997:488615448861544886885732Escherichia coli UTI89, complete genomehypothetical protein7e-22103
NC_008253:4817864:482665248266524827383732Escherichia coli 536, complete genomehypothetical protein7e-22103
NC_010322:5293652:531395953139595314558600Pseudomonas putida GB-1 chromosome, complete genometransposase2e-21102
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage3e-21101
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein5e-2097.4
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-1996.7
NC_012691:2476223:249796124979612498647687Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-1892.4
NC_012759:2633949:264438126443812645007627Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein4e-1891.7
NC_010473:2839902:285033428503342850960627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein4e-1891.7
AC_000091:2747520:275920327592032759829627Escherichia coli W3110 DNA, complete genomehypothetical protein4e-1891.7
NC_000913:2746886:275856927585692759195627Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein4e-1891.7
NC_018691:3525430:356448435644843565281798Alcanivorax dieselolei B5 chromosome, complete genomeConserved prophage protein3e-1788.6
NC_014618:690056:703227703227703925699Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein7e-1787
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein3e-1582
NC_011274:311843:329893329893330726834Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-1063.9
NC_018678:2382708:238932323893232390021699Alteromonas macleodii str. 'English Channel 673' chromosome,prophage1e-0860.1
NC_016944:514742:529019529019529693675Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein2e-0859.3
NC_012668:83641:906549065491328675Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-0859.3
NC_002505:514732:529011529011529685675Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-0859.3
NC_017328:1075535:109037810903781090674297Shigella flexneri 2002017 chromosome, complete genomehypothetical protein2e-0652.4