Pre_GI: BLASTP Hits

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Query: NC_009708:2245586:2249767 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2249767, End: 2250063, Length: 297

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1765399:178396117839611784257297Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-52202
NC_008149:1842500:187744818774481877744297Yersinia pestis Nepal516, complete genomehypothetical protein6e-52202
NC_004088:2227278:224506022450602245356297Yersinia pestis KIM, complete genomehypothetical protein6e-52202
NC_008150:1705152:174078717407871741083297Yersinia pestis Antiqua, complete genomehypothetical protein6e-52202
NC_009381:1064227:106774910677491068045297Yersinia pestis Pestoides F chromosome, complete genomeYciI-like protein6e-52202
NC_017168:3290380:329328032932803293576297Yersinia pestis A1122 chromosome, complete genomeYciI-like protein6e-52202
NC_010465:2282874:228710622871062287351246Yersinia pseudotuberculosis YPIII, complete genomeYCII-related3e-41167
NC_013364:1596278:160394716039471604243297Escherichia coli O111:H- str. 11128, complete genomeputative enzyme2e-36150
NC_010473:1384000:139798913979891398285297Escherichia coli str. K-12 substr. DH10B, complete genomepredicted enzyme2e-36150
NC_009801:1392696:139943013994301399726297Escherichia coli E24377A, complete genomeYciL domain protein2e-36150
NC_007384:2007467:202406120240612024453393Shigella sonnei Ss046, complete genomehypothetical protein3e-36150
NC_007712:2287053:228973322897332290119387Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-36149
NC_007606:1209132:121494612149461215338393Shigella dysenteriae Sd197, complete genomehypothetical protein2e-35147
NC_020063:2011019:201407420140742014370297Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-35147
NC_011283:2185462:219408221940822194378297Klebsiella pneumoniae 342 chromosome, complete genomeYciI-like protein2e-35147
NC_013850:2103469:212763221276322127928297Klebsiella variicola At-22 chromosome, complete genomeYCII-related protein2e-35147
NC_012779:1629731:163963516396351639928294Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-33140
NC_013960:2366910:238629323862932386592300Nitrosococcus halophilus Nc4 chromosome, complete genomeYCII-related protein4e-30130
NC_020541:1786500:181991718199171820219303Rhodanobacter sp. 2APBS1, complete genomehypothetical protein6e-30129
NC_010410:513298:535589535589535891303Acinetobacter baumannii AYE, complete genomehypothetical protein5e-1993.2
NC_014166:2621500:262466026246602624947288Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeYCII-related protein3e-0857.4
NC_017192:2548933:255006925500692550356288Arcobacter sp. L, complete genomehypothetical protein6e-0856.2
NC_010170:1551923:156968315696831569988306Bordetella petrii, complete genomehypothetical protein4e-0753.5