Pre_GI: BLASTP Hits

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Query: NC_009708:1131500:1152502 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 1152502, End: 1153161, Length: 660

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006155:3596120:360502136050213605680660Yersinia pseudotuberculosis IP 32953, complete genomeputative regulatory membrane protein.2e-104377
NC_010634:3509880:351878135187813519440660Yersinia pseudotuberculosis PB1/+, complete genometranscriptional regulator, CadC2e-104377
NC_010159:3448490:345833334583333459049717Yersinia pestis Angola, complete genome3e-93340
NC_003143:875367:884191884191884907717Yersinia pestis CO92, complete genomeputative regulatory membrane protein3e-93340
NC_008149:3373229:338205333820533382769717Yersinia pestis Nepal516, complete genomeregulatory membrane protein3e-93340
NC_014029:1146900:116901011690101169726717Yersinia pestis Z176003 chromosome, complete genomeputative regulatory membrane protein3e-93340
NC_017154:1089044:111115511111551111871717Yersinia pestis D106004 chromosome, complete genomeputative regulatory membrane protein3e-93340
NC_017160:1092839:111382711138271114543717Yersinia pestis D182038 chromosome, complete genomeputative regulatory membrane protein3e-93340
NC_017168:199381:220375220375221091717Yersinia pestis A1122 chromosome, complete genomeputative regulatory membrane protein3e-93340
NC_017265:1000342:102245510224551023171717Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative regulatory membrane protein3e-93340
NC_010465:1118147:114095811409581141710753Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, CadC2e-92338
NC_008150:513783:535893535893536642750Yersinia pestis Antiqua, complete genomeputative regulatory membrane protein1e-92338
NC_004088:3505383:351420735142073514911705Yersinia pestis KIM, complete genomehypothetical protein1e-90332
NC_015224:1067390:108967810896781090337660Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,transcriptional regulator, CadC2e-48192
NC_008800:3642679:365260736526073653266660Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,reguatory protein1e-45182
NC_010694:2138000:217087921708792171457579Erwinia tasmaniensis, complete genomehypothetical protein5e-1167.8
NC_012214:2221702:225819822581982258842645Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-0860.5
NC_013961:1622616:163233816323381632937600Erwinia amylovora, complete genomeTranscriptional regulatory protein glnR2e-0859.3
NC_013971:1660144:166986616698661670465600Erwinia amylovora ATCC 49946 chromosome, complete genometranscriptional regulator2e-0859.3
NC_017249:60216:7104371043726741632Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0754.7
NC_020541:3156500:3165653316565331683102658Rhodanobacter sp. 2APBS1, complete genometranscriptional regulatory protein,protein kinase family protein1e-0653.1
NC_010694:2971170:298044129804412980908468Erwinia tasmaniensis, complete genomeProbable transcriptional regulatory protein8e-0650.4
NC_013971:2876733:288575228857522886216465Erwinia amylovora ATCC 49946 chromosome, complete genometranscriptional regulator9e-0650.4