Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4488511 Kineococcus radiotolerans SRS30216, complete genome

Start: 4488511, End: 4489755, Length: 1245

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:5847699:5851991585199158532711281Rhodococcus opacus B4, complete genomerhodocoxin reductase5e-36152
NC_018531:1991218:2005266200526620064471182Arthrobacter sp. Rue61a chromosome, complete genomeferredoxin reductase / NAD(FAD)-dependent dehydrogenase5e-36152
NC_018581:1718023:1744330174433017455621233Gordonia sp. KTR9 chromosome, complete genomeferredoxin reductase5e-35149
NC_015856:439795:4425484425484438071260Collimonas fungivorans Ter331 chromosome, complete genomeferredoxin reductase9e-35148
NC_018691:2254566:2263967226396722651361170Alcanivorax dieselolei B5 chromosome, complete genomePyridine nucleotide-disulfide oxidoreductase domain protein6e-33142
NC_013856:189768:1932371932371944901254Azospirillum sp. B510 plasmid pAB510b, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-31137
NC_007333:1411050:1429404142940414306481245Thermobifida fusca YX, complete genomeputative ferredoxin reductase6e-31135
NC_015312:848403:8599438599438611841242Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeferredoxin--NAD(+) reductase4e-30132
NC_007347:1596040:1596040159604015972871248Ralstonia eutropha JMP134 chromosome 1, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase6e-30132
NC_015957:527777:5263995263995277961398Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-28127
NC_016582:389729:3897293897293909611233Streptomyces bingchenggensis BCW-1 chromosome, complete genomeferredoxin reductase1e-27124
NC_008740:683081:6866196866196878691251Marinobacter aquaeolei VT8, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-27123
NC_008699:857837:8737998737998750761278Nocardioides sp. JS614, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase7e-27122
NC_002696:3759551:3772890377289037741281239Caulobacter crescentus CB15, complete genomeferredoxin reductase2e-26120
NC_008826:539835:5496405496405509171278Methylibium petroleiphilum PM1 plasmid RPME01, complete sequenceputative ferredoxin reductase7e-26118
NC_015588:2939747:2953695295369529549361242Isoptericola variabilis 225 chromosome, complete genomeFerredoxin--NAD(+) reductase3e-25116
NC_016947:1480282:1482215148221514834591245Mycobacterium intracellulare MOTT-02 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-25116
NC_016585:1004000:1017925101792510191871263Azospirillum lipoferum 4B plasmid AZO_p1, complete sequenceputative oxidoreductase3e-25116
NC_008740:443274:5052465052465064061161Marinobacter aquaeolei VT8, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-25116
NC_007953:572926:5975125975125987591248Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative FAD-dependent pyridine nucleotide- disulphide oxidoreductase8e-25115
NC_017323:689512:7064987064987077241227Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceferredoxin--NAD(+) reductase1e-24114
NC_008705:3430839:3439290343929034404891200Mycobacterium sp. KMS, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-24113
NC_008146:3401743:3411008341100834122071200Mycobacterium sp. MCS, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-24113
NC_009077:3376351:3384802338480233860011200Mycobacterium sp. JLS, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-24113
NC_018583:95388:9538895388965871200Gordonia sp. KTR9 plasmid pGKT3, complete sequenceputative NAD(FAD)-dependent dehydrogenase6e-24112
NC_009512:3282500:3287960328796032891681209Pseudomonas putida F1, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-23111
NC_015723:961909:9661999661999677371539Cupriavidus necator N-1 chromosome 2, complete sequencerhodocoxin reductase ThcD2e-23110
NC_015596:1511961:1528076152807615293021227Sinorhizobium meliloti AK83 chromosome 2, complete sequenceferredoxin--NAD(+) reductase3e-23109
NC_017506:1:3092230922322201299Marinobacter adhaerens HP15 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-23108
NC_015976:2064387:2076752207675220780141263Sphingobium sp. SYK-6, complete genomeFAD-dependent oxidoreductase1e-22107
NC_015844:5375784:5393917539391753951731257Zobellia galactanivorans, complete genomeferredoxin reductase1e-22107
NC_010625:1370462:1392266139226613935131248Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase3e-22106
NC_009338:4869700:4884413488441348856151203Mycobacterium gilvum PYR-GCK chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-22105
NC_012982:2730000:2732163273216327333711209Hirschia baltica ATCC 49814, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-21104
NC_009620:1504933:1522703152270315239291227Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-21104
NC_016947:2380500:2389420238942023905261107Mycobacterium intracellulare MOTT-02 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-21104
NC_010612:3813481:3838555383855538397571203Mycobacterium marinum M, complete genomeferredoxin reductase3e-21103
NC_014931:5088125:5119804511980451210271224Variovorax paradoxus EPS chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase6e-21102
NC_016625:171341:1947291947291959281200Burkholderia sp. YI23 chromosome 2, complete sequenceputative ferredoxin reductase2e-20100
NC_014221:1541517:1563811156381115653941584Truepera radiovictrix DSM 17093 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-2099.4
NC_007355:2426000:2431437243143724328701434Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceputative ferredoxin reductase4e-2099.4
NC_014640:4193193:4214935421493542161581224Achromobacter xylosoxidans A8 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase family protein 41e-1894.4
NC_016887:1714664:1727164172716417283661203Nocardia cyriacigeorgica GUH-2, complete genomeputidaredoxin reductase3e-1893.6
NC_015312:6398931:6413865641386564151631299Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeferredoxin--NAD(+) reductase4e-1893.2
NC_016604:3137694:3140096314009631413701275Mycobacterium rhodesiae NBB3 chromosome, complete genomeNAD(P)H-nitrite reductase5e-1892.8
NC_011666:1572487:1590077159007715913001224Methylocella silvestris BL2, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase4e-1892.8
NC_009439:442890:4563104563104574671158Pseudomonas mendocina ymp, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase4e-1892.8
NC_016604:3137694:3154646315464631558871242Mycobacterium rhodesiae NBB3 chromosome, complete genomeNAD(FAD)-dependent dehydrogenase6e-1892
NC_015726:1813961:1813961181396118151961236Cupriavidus necator N-1 chromosome 1, complete sequencebenzene 1,2-dioxygenase system ferredoxin--NAD(+) reductase subunit8e-1891.7
NC_009077:1687304:1701784170178417031901407Mycobacterium sp. JLS, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase6e-1789
NC_009338:603663:6179286179286191691242Mycobacterium gilvum PYR-GCK chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase7e-1788.6
NC_009338:686932:7008827008827021231242Mycobacterium gilvum PYR-GCK chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase7e-1788.6
NC_013929:10109680:1011110010111100101122571158Streptomyces scabiei 87.22 chromosome, complete genomeferredoxin reductase1e-1687.8
NC_008699:2260606:2283410228341022846181209Nocardioides sp. JS614, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase6e-1685.5
NC_009512:3251545:3269499326949932707311233Pseudomonas putida F1, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase1e-1584.7
NC_014814:132404:1462651462651475061242Mycobacterium sp. Spyr1 chromosome, complete genomephthalate 3,4-dioxygenase, ferredoxin reductase subunit1e-1584.7
NC_012521:148886:1724961724961737341239Rhodococcus opacus B4 plasmid pROB02, complete sequencebenzene dioxygenase ferredoxin reductase subunit1e-1584.3
NC_008705:1752180:1766305176630517677111407Mycobacterium sp. KMS, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-1584
NC_008146:1748026:1762151176215117635571407Mycobacterium sp. MCS, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-1584
NC_008726:494769:5084345084345098401407Mycobacterium vanbaalenii PYR-1, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-1584
NC_016147:1825827:1835450183545018366761227Pseudoxanthomonas spadix BD-a59 chromosome, complete genomebiphenyl 2,3-dioxygenase ferredoxin reductase subunit (BphA4)3e-1583.6
NC_017249:2109843:2136047213604721372671221Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1480.5
NC_014100:172452:1776851776851789231239Caulobacter segnis ATCC 21756 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1480.5
NC_015957:8677395:8700757870075787020521296Streptomyces violaceusniger Tu 4113 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-1377
NC_007406:632436:6448716448716463911521Nitrobacter winogradskyi Nb-255, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase5e-1375.9
NC_010170:3944228:3949910394991039511421233Bordetella petrii, complete genomeputative ferredoxin reductase5e-1272.8
NC_008095:5062491:5066197506619750678401644Myxococcus xanthus DK 1622, complete genomeferredoxin reductase8e-1272
NC_002754:1061851:1064502106450210657161215Sulfolobus solfataricus P2, complete genomeToluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase component, probable (todA)7e-1272
NC_012622:786554:7982767982767995081233Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-1170.9
NC_007964:717590:7302287302287317481521Nitrobacter hamburgensis X14, complete genomeFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-1170.5
NC_013769:316789:3424753424753436891215Sulfolobus islandicus L.D.8.5 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase5e-1169.3
NC_012726:346539:3536593536593548731215Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-1067.8
NC_017276:337286:3445593445593457731215Sulfolobus islandicus REY15A chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-1067.8
NC_010625:1602191:1629969162996916312251257Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceFAD-dependent pyridine nucleotide-disulphide oxidoreductase2e-1067
NC_012726:287637:3044033044033056261224Sulfolobus islandicus M.16.4 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-1066.6
NC_015675:4526500:4527889452788945294331545Mesorhizobium opportunistum WSM2075 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase4e-1066.2
NC_014039:151631:1731251731251745041380Propionibacterium acnes SK137 chromosome, complete genomepyridine nucleotide-disulfide oxidoreductase6e-1065.5
NC_017275:377800:3842483842483854621215Sulfolobus islandicus HVE10/4 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-0964.7
NC_012984:3077004:3083530308353030847351206Lactobacillus plantarum JDM1, complete genomeoxidoreductase3e-0757
NC_014834:614890:6550266550266562071182Rhodopseudomonas palustris DX-1 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase7e-0755.5
NC_015850:1947000:1983369198336919846431275Acidithiobacillus caldus SM-1 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase7e-0755.5