Pre_GI: BLASTP Hits

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Query: NC_009381:3094939:3097749 Yersinia pestis Pestoides F chromosome, complete genome

Start: 3097749, End: 3098432, Length: 684

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:3240379:3242658324265832438721215Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative membrane efflux protein2e-105381
NC_004088:1196875:1225486122548612267001215Yersinia pestis KIM, complete genomedrug efflux protein2e-105381
NC_003143:3446740:3449065344906534502791215Yersinia pestis CO92, complete genomeputative membrane efflux protein2e-105381
NC_005810:872672:9033199033199045331215Yersinia pestis biovar Microtus str. 91001, complete genomeputative membrane efflux protein2e-105381
NC_008149:1122693:1154660115466011558741215Yersinia pestis Nepal516, complete genomemembrane efflux protein2e-105381
NC_008150:2878450:2880730288073028819441215Yersinia pestis Antiqua, complete genomeputative membrane efflux protein2e-105381
NC_010159:1288000:1316842131684213180561215Yersinia pestis Angola, complete genomefosmidomycin resistance protein2e-105381
NC_014029:3501500:3503469350346935046831215Yersinia pestis Z176003 chromosome, complete genomeputative membrane efflux protein2e-105381
NC_017154:3444497:3446434344643434476481215Yersinia pestis D106004 chromosome, complete genomeputative membrane efflux protein2e-105381
NC_017160:3426486:3428423342842334296371215Yersinia pestis D182038 chromosome, complete genomeputative membrane efflux protein2e-105381
NC_017168:2281040:2311787231178723130011215Yersinia pestis A1122 chromosome, complete genomeputative membrane efflux protein2e-105381
NC_010634:1175404:1204546120454612057601215Yersinia pseudotuberculosis PB1/+, complete genomemajor facilitator transporter1e-104379
NC_006155:1191307:1222003122200312232171215Yersinia pseudotuberculosis IP 32953, complete genomeMFS cationic antimicrobial peptides (CAMPs) efflux/K+ antiporter, rosA subunit1e-104379
NC_009708:3411153:3413089341308934143031215Yersinia pseudotuberculosis IP 31758 chromosome, complete genomefosmidomycin resistance protein1e-104379
NC_010465:3465351:346843334684333469212780Yersinia pseudotuberculosis YPIII, complete genomeputative membrane efflux protein4e-102370
NC_008800:3330944:3334410333441033355161107Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative membrane efflux protein2e-94345
NC_015224:1391088:1413564141356414147961233Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative membrane efflux protein8e-94342
NC_020541:2551539:2573647257364725749811335Rhodanobacter sp. 2APBS1, complete genomenitrate/nitrite transporter1e-65249
NC_010511:2703684:2722369272236927236011233Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter2e-59229
NC_015177:915366:9330859330859343081224Pedobacter saltans DSM 12145 chromosome, complete genomemajor facilitator superfamily MFS_12e-57222
NC_014933:2525393:2528977252897725301731197Bacteroides helcogenes P 36-108 chromosome, complete genomemajor facilitator superfamily MFS_18e-50196
NC_014840:286767:2867672867672879991233Pantoea sp. At-9b plasmid pPAT9B03, complete sequencemajor facilitator superfamily MFS_15e-49194
NC_008752:2334511:2337544233754423388391296Acidovorax avenae subsp. citrulli AAC00-1, complete genomemajor facilitator superfamily MFS_14e-47187
NC_010511:7024412:7062182706218270633931212Methylobacterium sp. 4-46 chromosome, complete genomemajor facilitator superfamily transporter6e-42170
NC_012914:5938566:5953287595328759545041218Paenibacillus sp. JDR-2, complete genomemajor facilitator superfamily MFS_12e-31135
NC_014483:1146682:1165963116596311672311269Paenibacillus polymyxa E681 chromosome, complete genomeFosmidomycin resistance protein3e-31134
NC_011772:1684404:1696978169697816981891212Bacillus cereus G9842, complete genomefosmidomycin resistance protein6e-31134
NC_009725:692237:7438087438087450371230Bacillus amyloliquefaciens FZB42, complete genomeYfnC2e-30132
NC_019842:710308:7335147335147347431230Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein2e-30132
NC_016641:2894899:2928002292800229292701269Paenibacillus terrae HPL-003 chromosome, complete genomeFosmidomycin resistance protein4e-30131
NC_009454:2663539:2697056269705626983511296Pelotomaculum thermopropionicum SI, complete genomearabinose efflux permease3e-1065.5