Pre_GI: BLASTP Hits

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Query: NC_009092:521519:536139 Shewanella loihica PV-4, complete genome

Start: 536139, End: 537440, Length: 1302

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008322:641197:6499886499886512591272Shewanella sp. MR-7, complete genomeHipA domain protein1e-173609
NC_004347:718091:7233087233087246091302Shewanella oneidensis MR-1, complete genomehypothetical protein2e-173608
NC_009663:1656804:1660691166069116619771287Sulfurovum sp. NBC37-1, complete genomehypothetical protein3e-80299
NC_012792:627500:6376566376566390261371Variovorax paradoxus S110 chromosome 2, complete genomeHipA N-terminal domain protein6e-61234
NC_014323:4665610:4695226469522646965451320Herbaspirillum seropedicae SmR1 chromosome, complete genomeHipA domain-containing protein1e-52207
NC_011916:467106:4975844975844988551272Caulobacter crescentus NA1000 chromosome, complete genomeprotein hipA2e-35150
NC_012918:356019:3612303612303624741245Geobacter sp. M21 chromosome, complete genomeHipA N-terminal domain-containing protein8e-32138
NC_015850:736680:7505247505247517771254Acidithiobacillus caldus SM-1 chromosome, complete genomeprotein HipA1e-28128
NC_018000:2964500:2964960296496029662281269Sinorhizobium fredii USDA 257 chromosome, complete genomekinase Y4mE4e-28125
NC_020304:752012:7586387586387598941257Desulfocapsa sulfexigens DSM 10523, complete genomeHipA domain-containing protein5e-27122
NC_010677:1296000:1308129130812913094871359Francisella tularensis subsp. mediasiatica FSC147, complete genometranscription regulator3e-24113
NC_015563:4583906:4597729459772945990361308Delftia sp. Cs1-4 chromosome, complete genomeHipA N-terminal domain-containing protein3e-21103
NC_011916:2967624:2977478297747829788121335Caulobacter crescentus NA1000 chromosome, complete genomehipA-like phosphatidylinositol 3/4-kinase4e-21102
NC_002696:2941644:2951498295149829528321335Caulobacter crescentus CB15, complete genomehypothetical protein4e-21102
NC_014550:3534000:3534949353494935362351287Arthrobacter arilaitensis Re117, complete genomeHipA-like protein3e-1997.1
NC_014151:3797861:3803799380379938050371239Cellulomonas flavigena DSM 20109 chromosome, complete genomeHipA N-terminal domain protein1e-1894.7
NC_013172:3093467:3093467309346730947021236Brachybacterium faecium DSM 4810, complete genomeHipA domain-containing protein2e-1894
NC_014973:4174668:4178934417893441802501317Geobacter sp. M18 chromosome, complete genomeHipA N-terminal domain-containing protein8e-1892
NC_012668:2258854:2281544228154422828631320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein9e-1891.7
NC_012668:1623350:1644773164477316460921320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein9e-1891.7
NC_012668:160357:1663781663781676971320Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHipA protein9e-1891.7
NC_014830:1602198:1611681161168116129581278Intrasporangium calvum DSM 43043 chromosome, complete genomeHipA N-terminal domain protein1e-1791.7
NC_015138:5046921:5051982505198250533041323Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeHipA N-terminal domain-containing protein3e-1789.7
NC_015633:2565753:2582282258228225836011320Vibrio anguillarum 775 chromosome chromosome I, complete sequenceHipA6e-1789
NC_017075:1:1110611106124491344Rubrivivax gelatinosus IL144, complete genomeHipA N-terminal domain-containing protein9e-1788.6
NC_013714:2086526:2137627213762721389281302Bifidobacterium dentium Bd1, complete genomeHipA protein2e-1687.4
NC_012811:227541:2275412275412288871347Methylobacterium extorquens AM1 megaplasmid, complete sequenceHipA-like protein2e-1687.4
NC_017219:2292040:2296205229620522975601356Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-1687
NC_011593:2288993:2296387229638722977421356Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,HipA domain-containing protein3e-1687
NC_020063:2230000:2255666225566622569791314Enterobacteriaceae bacterium strain FGI 57, complete genomeHipA domain-containing protein4e-1686.3
NC_015566:547387:5553105553105566081299Serratia sp. AS12 chromosome, complete genomeHipA N-terminal domain-containing protein2e-1584.3
NC_015567:547500:5554965554965567941299Serratia sp. AS9 chromosome, complete genomeHipA N-terminal domain-containing protein2e-1584.3
NC_021066:1393750:1414359141435914156901332Raoultella ornithinolytica B6, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator1e-1584.3
NC_011741:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB5e-1582.8
CU928160:1579375:1601102160110216024241323Escherichia coli IAI1 chromosome, complete genomeregulator with hipB5e-1582.8
NC_014965:997344:1023026102302610243541329Vibrio vulnificus MO6-24/O chromosome I, complete sequenceHipA protein5e-1582.4
CP002185:1681327:1703053170305317043751323Escherichia coli W, complete genomeregulator with HipB7e-1582
CP002516:2395578:2401473240147324027951323Escherichia coli KO11, complete genomeHipA N-terminal domain protein7e-1582
NC_016902:2395578:2401473240147324027951323Escherichia coli KO11FL chromosome, complete genomeHipA N-terminal domain-containing protein7e-1582
NC_007954:334795:3419373419373432441308Shewanella denitrificans OS217, complete genomeHipA-like protein7e-1582
NC_014355:1461355:1478780147878014799851206Candidatus Nitrospira defluvii, complete genomeputative serine kinase HipA7e-1582
NC_010468:2345781:2351690235169023530121323Escherichia coli ATCC 8739, complete genomeHipA N-terminal domain protein9e-1581.6
NC_010473:1661000:1678503167850316798251323Escherichia coli str. K-12 substr. DH10B, complete genomeregulator with hipB9e-1581.6
AC_000091:1574000:1592568159256815938901323Escherichia coli W3110 DNA, complete genomeregulator with hipB9e-1581.6
NC_000913:1570431:1588878158887815902001323Escherichia coli K12, complete genomeregulator with hipB9e-1581.6
NC_009800:1589000:1607677160767716089991323Escherichia coli HS, complete genomeprotein HipA9e-1581.6
NC_012759:1462490:1480937148093714822591323Escherichia coli BW2952 chromosome, complete genomeregulator with hipB9e-1581.6
NC_012947:2228235:2232110223211022334321323Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeHipA N-terminal domain protein9e-1581.6
NC_012967:1546000:1567421156742115687431323Escherichia coli B str. REL606 chromosome, complete genomeregulator with hipB9e-1581.6
NC_004459:2025436:2039667203966720409951329Vibrio vulnificus CMCP6 chromosome I, complete sequenceHipA-like protein1e-1481.3
CP002797:1591000:1604080160408016053811302Escherichia coli NA114, complete genomeHipA protein1e-1481.3
NC_007384:1696831:1696831169683116981521322Shigella sonnei Ss046, complete genome2e-1480.9
NC_009838:81913:8633986339876641326Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceputative capsule biosynthesis protein1e-1378.2
NC_007953:1434705:1439954143995414412881335Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein3e-1377
NC_011742:1574036:1591112159111215924341323Escherichia coli S88 chromosome, complete genomeregulator with hipB3e-1377
NC_014216:3003347:3003347300334730045641218Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeHipA N-terminal domain protein3e-1376.6
NC_008278:256427:2701312701312714291299Frankia alni ACN14a, complete genomeputative HipA protein.4e-1376.6
NC_011149:4677412:4692627469262746939551329Salmonella enterica subsp. enterica serovar Agona str. SL483,protein HipA2e-1273.9
NC_020181:3328844:3334219333421933357331515Enterobacter aerogenes EA1509E, complete genomeHipA protein3e-1273.2
NC_015635:3542125:3555796355579635569981203Microlunatus phosphovorus NM-1, complete genomehypothetical protein6e-1272.4
NC_014246:876000:8813418813418828461506Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative transcriptional regulator2e-1170.5
NC_002655:1966464:1972050197205019730721023Escherichia coli O157:H7 EDL933, complete genomepersistence to inhibition of murein or DNA biosynthesis, DNA-binding regulator5e-1169.3
NC_012586:897148:8971488971488984041257Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceHipA-like protein6e-1168.9
NC_011750:1849561:186943618694361870125690Escherichia coli IAI39 chromosome, complete genome9e-1065.1