Pre_GI: BLASTP Hits

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Query: NC_009092:1599526:1620695 Shewanella loihica PV-4, complete genome

Start: 1620695, End: 1622437, Length: 1743

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015500:533528:5452045452045469401737Treponema brennaborense DSM 12168 chromosome, complete genomethiamine pyrophosphate TPP-binding domain-containing protein0664
NC_015164:325212:3301013301013318491749Bacteroides salanitronis DSM 18170 chromosome, complete genomethiamine pyrophosphate TPP-binding domain-containing protein7e-167587
NC_015164:4023881:4035317403531740370321716Bacteroides salanitronis DSM 18170 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylic-acidsynthase1e-161570
NC_017218:534699:5499205499205517101791Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomeputative 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase4e-143508
NC_004307:1108325:1137337113733711390821746Bifidobacterium longum NCC2705, complete genomepossible decarboxylase with tpp domain+d2361e-92340
NC_013714:2086526:2133442213344221351871746Bifidobacterium dentium Bd1, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase3e-92339
NC_015052:471944:4805574805574823381782Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-79297
NC_014656:1161188:1179837117983711816571821Bifidobacterium longum subsp. longum BBMN68 chromosome, completedecarboxylase2e-78293
NC_015578:1633393:1648485164848516514032919Treponema primitia ZAS-2 chromosome, complete genome2-oxoglutarate decarboxylase8e-71268
NC_015164:3431279:3441192344119234428591668Bacteroides salanitronis DSM 18170 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase2e-65250
NC_019904:5241444:5277343527734352790791737Echinicola vietnamensis DSM 17526 chromosome, complete genome2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit B9e-64245
NC_009614:3081190:3103524310352431051971674Bacteroides vulgatus ATCC 8482 chromosome, complete genome2-oxoglutarate decarboxylase2e-60234
NC_009615:1305678:1310996131099613126841689Parabacteroides distasonis ATCC 8503 chromosome, complete genome2-oxoglutarate decarboxylase1e-52208
NC_006138:273237:2732372732372748501614Desulfotalea psychrophila LSv54, complete genomesimilar to menaquinone biosynthesis protein (MenD)3e-37157
NC_015571:801715:8177028177028194381737Porphyromonas gingivalis TDC60, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase6e-33142
NC_002950:1571383:1601103160110316028361734Porphyromonas gingivalis W83, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase8e-33142
NC_016610:2077603:2077603207760320793361734Tannerella forsythia ATCC 43037 chromosome, complete genome2-oxoglutarate synthase subunit, 2-oxoacid-ferredoxin oxidoreductase subunit B2e-32141
NC_011999:1633262:1631617163161716332691653Macrococcus caseolyticus JCSC5402, complete genomemenaquinone biosynthesis bifunctional protein3e-22107
NC_021182:1983456:1987026198702619886751650Clostridium pasteurianum BC1, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase2e-21104
NC_014335:4566692:4578452457845245802061755Bacillus cereus biovar anthracis str. CI chromosome, complete2-oxoglutarate decarboxylase7e-1789.4
NC_008600:4626464:4643120464312046448741755Bacillus thuringiensis str. Al Hakam, complete genomemenaquinone biosynthesis protein1e-1688.6
NC_011969:4556296:4568931456893145706851755Bacillus cereus Q1 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase1e-1688.6
NC_012472:4630485:4647149464714946489031755Bacillus cereus 03BB102, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase2e-1688.2
NC_011725:4799905:4811445481144548131991755Bacillus cereus B4264 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase3e-1687.4
NC_014171:4681822:4693888469388846956421755Bacillus thuringiensis BMB171 chromosome, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase5e-1686.7
NC_013922:3696697:3706915370691537087291815Natrialba magadii ATCC 43099 chromosome, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase2e-1584.3
NC_013730:2403930:2405156240515624069041749Spirosoma linguale DSM 74, complete genome2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase4e-1583.6
NC_016779:4588000:4600745460074546024991755Bacillus cereus F837/76 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase9e-1375.9
NC_011772:4763542:4780655478065547824091755Bacillus cereus G9842, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase5e-1273.2
NC_003909:4614789:4625021462502146267751755Bacillus cereus ATCC 10987, complete genome2-oxoglutarate decarboxylase8e-1272.8
NC_013510:2782240:2794879279487927965551677Thermomonospora curvata DSM 43183, complete genome2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase9e-1272.4
NC_004722:4767294:4778271477827147800251755Bacillus cereus ATCC 14579, complete genome2-oxoglutarate decarboxylase8e-1272.4
NC_017200:4632000:4652606465260646543601755Bacillus thuringiensis serovar finitimus YBT-020 chromosome,2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase1e-1172
NC_016771:4569941:4580698458069845824521755Bacillus cereus NC7401, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase1e-1171.6
NC_011658:4616933:4626933462693346286871755Bacillus cereus AH187 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase1e-1171.6
NC_012759:2261416:2261416226141622630861671Escherichia coli BW2952 chromosome, complete genome2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase3e-1170.5
NC_010473:2465844:2466599246659924682691671Escherichia coli str. K-12 substr. DH10B, complete genomebifunctional 2-oxoglutarate decarboxylase and SHCHC synthase3e-1170.5
NC_000913:2373984:2375611237561123772811671Escherichia coli K12, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase3e-1170.5
AC_000091:2379670:2382259238225923839291671Escherichia coli W3110 DNA, complete genomebifunctional 2-oxoglutarate decarboxylase and SHCHC synthase3e-1170.5
NC_004459:3243987:3245651324565132473451695Vibrio vulnificus CMCP6 chromosome I, complete sequence2-oxoglutarate decarboxylase4e-1170.1
NC_009440:1857589:1875011187501118767291719Metallosphaera sedula DSM 5348 chromosome, complete genomeacetolactate synthase catalytic subunit2e-1068.2
NC_015435:310406:3104063104063121241719Metallosphaera cuprina Ar-4 chromosome, complete genomeacetolactate synthase catalytic subunit8e-1065.9
NC_013174:562856:5762325762325780611830Jonesia denitrificans DSM 20603, complete genome2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase2e-0964.7
NC_015958:11511:2271322713243771665Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeacetolactate synthase, large subunit, biosynthetic type3e-0963.9
NC_012912:647369:6610846610846627481665Dickeya zeae Ech1591, complete genomeacetolactate synthase, large subunit, biosynthetic type6e-0963.2
NC_017027:1329708:1346619134661913483251707Pasteurella multocida subsp. multocida str. HN06 chromosome,2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase1e-0862
NC_015518:1052701:1052701105270110544191719Acidianus hospitalis W1 chromosome, complete genomeacetolactate synthase, large subunit, biosynthetic type3e-0860.8
NC_017275:377800:3905293905293922021674Sulfolobus islandicus HVE10/4 chromosome, complete genomethiamine pyrophosphate protein central region3e-0860.5
NC_013769:316789:3485033485033501761674Sulfolobus islandicus L.D.8.5 chromosome, complete genomethiamine pyrophosphate enzyme, central region4e-0860.5
NC_012589:347020:3602143602143618871674Sulfolobus islandicus L.S.2.15, complete genomethiamine pyrophosphate protein central region4e-0860.5
NC_016633:1130705:1133383113338311350651683Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeacetolactate synthase large subunit6e-0859.7
NC_017276:337286:3509383509383526111674Sulfolobus islandicus REY15A chromosome, complete genomethiamine pyrophosphate protein central region8e-0859.3
NC_015555:4478:1981019810214651656Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeacetolactate synthase, large subunit, biosynthetic type9e-0859.3
NC_020291:270234:2841182841182857911674Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeacetolactate synthase large subunit IlvB1e-0758.5
NC_020409:393329:4255384255384272141677Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeAcetolactate synthase isozyme 1 large subunit2e-0758.2
NC_012726:346539:3599463599463616191674Sulfolobus islandicus M.16.4 chromosome, complete genomethiamine pyrophosphate protein central region3e-0757.4
NC_014633:583858:5907635907635924481686Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceacetolactate synthase, large subunit3e-0757
NC_014393:1590893:1626690162669016283511662Clostridium cellulovorans 743B chromosome, complete genomeacetolactate synthase, large subunit, biosynthetic type6e-0756.6
NC_014150:2501299:2519645251964525213181674Brachyspira murdochii DSM 12563 chromosome, complete genomeacetolactate synthase, large subunit, biosynthetic type8e-0755.8
NC_003551:478065:4950594950594967561698Methanopyrus kandleri AV19, complete genomeacetolactate synthase large subunit9e-0755.8
NC_015711:7265439:7265439726543972672231785Myxococcus fulvus HW-1 chromosome, complete genomethiamine pyrophosphate protein1e-0655.5
NC_015733:2581324:2596734259673425983771644Pseudomonas putida S16 chromosome, complete genomeacetolactate synthase2e-0655.1
NC_014410:8694:1985819858215131656Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,acetolactate synthase, large subunit, biosynthetic type2e-0655.1
NC_008570:546736:5642705642705660001731Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase/2-oxoglutarate decarboxylase2e-0654.7
NC_019970:8938:2008420084217391656Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeacetolactate synthase, large subunit2e-0654.7
NC_017243:2383577:2394993239499323966661674Brachyspira intermedia PWS/A chromosome, complete genomeacetolactate synthase large subunit2e-0654.7
NC_009617:234782:2457862457862474591674Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeacetolactate synthase large subunit2e-0654.3
NC_010674:311378:3204333204333221061674Clostridium botulinum B str. Eklund 17B, complete genomeacetolactate synthase, large subunit, biosynthetic type2e-0654.3
NC_004545:229771:2424482424482441781731Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeacetolactate synthase large subunit4e-0653.9
NC_003030:3301342:3303326330332633049901665Clostridium acetobutylicum ATCC 824, complete genomeAcetolactate synthase large subunit3e-0653.9
NC_015687:3302372:3304953330495333066171665Clostridium acetobutylicum DSM 1731 chromosome, complete genomeacetolactate synthase large subunit3e-0653.9
NC_017295:3300500:3302583330258333042471665Clostridium acetobutylicum EA 2018 chromosome, complete genomeacetolactate synthase large subunit3e-0653.9
NC_008314:1559102:1567145156714515688961752Ralstonia eutropha H16 chromosome 2, complete sequenceIndole-3-pyruvate decarboxylase4e-0653.5
NC_012225:1213421:1225918122591812275911674Brachyspira hyodysenteriae WA1, complete genomeacetolactate synthase, large subunit, biosynthetic type4e-0653.5
NC_015732:3017387:3023884302388430256351752Spirochaeta caldaria DSM 7334 chromosome, complete genomeacetolactate synthase, large subunit, biosynthetic type6e-0653.1
NC_013156:127000:1307291307291325041776Methanocaldococcus fervens AG86, complete genomeacetolactate synthase, large subunit, biosynthetic type5e-0653.1
NC_016112:3840053:3840053384005338418341782Methylomicrobium alcaliphilum chromosome, complete genomeacetolactate synthase large subunit7e-0652.8
NC_008700:2451798:2453387245338724551081722Shewanella amazonensis SB2B, complete genomeacetolactate synthase large subunit7e-0652.8
NC_009714:1084000:1100473110047311021581686Campylobacter hominis ATCC BAA-381, complete genomeacetolactate synthase 3 catalytic subunit8e-0652.4
NC_013887:245236:2654952654952672701776Methanocaldococcus sp. FS406-22 chromosome, complete genomeacetolactate synthase, large subunit, biosynthetic type9e-0652.4