Pre_GI: BLASTP Hits

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Query: NC_009092:1441813:1450808 Shewanella loihica PV-4, complete genome

Start: 1450808, End: 1451473, Length: 666

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012691:1250385:127024212702421270910669Tolumonas auensis DSM 9187, complete genomehypothetical protein6e-39160
NC_015761:299386:308796308796309416621Salmonella bongori NCTC 12419, complete genomeprophage protein3e-34144
NC_010322:5293652:531395953139595314558600Pseudomonas putida GB-1 chromosome, complete genometransposase2e-33142
NC_013421:1505176:151089815108981511509612Pectobacterium wasabiae WPP163, complete genomehypothetical protein2e-33142
NC_013592:446092:463175463175463804630Dickeya dadantii Ech586, complete genomehypothetical protein8e-33140
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage2e-32139
NC_012912:1053618:107241210724121073035624Dickeya zeae Ech1591, complete genomeCP4-57 prophage; hypothetical protein3e-32138
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein6e-32137
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-31135
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-31135
NC_011751:3453683:350750035075003508105606Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-30133
NC_013353:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein3e-30132
AP010958:3627355:365744336574433658012570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein3e-30132
NC_004431:3409389:348439734843973484966570Escherichia coli CFT073, complete genomehypothetical protein3e-30131
NC_018691:3525430:356448435644843565281798Alcanivorax dieselolei B5 chromosome, complete genomeConserved prophage protein4e-30131
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein3e-29128
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein3e-29128
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein3e-29128
NC_013353:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein6e-29127
AP010958:2455052:247193524719352472504570Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein6e-29127
CP002797:2062006:208273220827322083301570Escherichia coli NA114, complete genomehypothetical protein8e-29127
NC_000913:2746886:275856927585692759195627Escherichia coli K12, complete genomeCP4-57 prophage; predicted protein3e-28125
AC_000091:2747520:275920327592032759829627Escherichia coli W3110 DNA, complete genomehypothetical protein3e-28125
NC_010473:2839902:285033428503342850960627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-57 prophage; predicted protein3e-28125
NC_012759:2633949:264438126443812645007627Escherichia coli BW2952 chromosome, complete genomeCP4-57 prophage protein3e-28125
NC_009708:915814:924077924077924703627Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-28125
NC_013716:5201097:523347852334785234047570Citrobacter rodentium ICC168, complete genomehypothetical protein3e-27122
NC_020418:116500:136581136581137168588Morganella morganii subsp. morganii KT, complete genometransposase3e-27121
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein7e-27120
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein3e-26118
NC_016944:514742:528313528313528957645Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein8e-26117
NC_002505:514732:528305528305528949645Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein8e-26117
NC_009901:1516340:152731215273121527938627Shewanella pealeana ATCC 700345, complete genometransposase1e-25116
NC_009708:915814:921173921173921802630Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-25115
NC_020064:3609844:362956736295673630199633Serratia marcescens FGI94, complete genomeProtein of unknown function (DUF3296)5e-25114
NC_010634:1342393:135022813502281350812585Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-23109
NC_015663:1869000:187942718794271879816390Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-23108
NC_020181:5130513:514061751406175141201585Enterobacter aerogenes EA1509E, complete genomeFIG00947185: hypothetical protein1e-22106
NC_009832:1946401:195677919567791957375597Serratia proteamaculans 568, complete genomehypothetical protein1e-22106
NC_016902:4236680:424190342419034242517615Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-2099.4
CP002516:4236680:424190342419034242517615Escherichia coli KO11, complete genomehypothetical protein2e-2099.4
CP002185:4750571:477035247703524770966615Escherichia coli W, complete genomehypothetical protein2e-2099.4
CP002797:4656327:465914946591494659889741Escherichia coli NA114, complete genomehypothetical protein2e-1995.9
NC_008563:3332114:334723833472383347978741Escherichia coli APEC O1, complete genomehypothetical protein3e-1995.1
NC_011742:3245500:326203032620303262770741Escherichia coli S88 chromosome, complete genomehypothetical protein3e-1995.1
NC_011750:4390000:440299944029994403730732Escherichia coli IAI39 chromosome, complete genomehypothetical protein6e-1994.4
NC_011083:4547825:457460345746034575334732Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein2e-1789.4
NC_014618:690056:703227703227703925699Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-1686.7
NC_004431:4319152:433086843308684331599732Escherichia coli CFT073, complete genomehypothetical protein1e-1686.7
NC_011745:3405520:341584334158433416574732Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-1685.9
NC_008563:4707826:471722247172224717953732Escherichia coli APEC O1, complete genomehypothetical protein2e-1685.9
NC_008253:4817864:482665248266524827383732Escherichia coli 536, complete genomehypothetical protein6e-1684.3
NC_007946:4875997:488615448861544886885732Escherichia coli UTI89, complete genomehypothetical protein6e-1684.3
NC_012691:2476223:249796124979612498647687Tolumonas auensis DSM 9187, complete genomehypothetical protein2e-1582.8
NC_018678:2382708:238932323893232390021699Alteromonas macleodii str. 'English Channel 673' chromosome,prophage4e-1478.2
NC_016445:1363831:142214014221401422433294Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein1e-1376.3
NC_012668:1688500:169647516964751696768294Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein1e-1376.3
NC_008751:2988235:300728930072893007885597Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein9e-1373.6
NC_011274:311843:329893329893330726834Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein6e-1064.3
NC_002505:514732:529011529011529685675Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein6e-0961.2
NC_012668:83641:906549065491328675Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein6e-0961.2
NC_016944:514742:529019529019529693675Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein6e-0961.2
NC_017328:1075535:109037810903781090674297Shigella flexneri 2002017 chromosome, complete genomehypothetical protein5e-0961.2
NC_002937:2068117:208875520887552089138384Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehypothetical protein2e-0858.9
NC_017270:1755552:178792217879221788140219Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein6e-0857.8
NC_009457:1444449:150384215038421504060219Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein6e-0857.8
NC_008577:4533574:454216045421604542978819Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein2e-0756.2
NC_016944:1978058:199705719970571997266210Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein7e-0754.3