Pre_GI: BLASTP Hits

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Query: NC_009077:2308634:2321856 Mycobacterium sp. JLS, complete genome

Start: 2321856, End: 2323211, Length: 1356

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism was isolated from creosote-contaminated soil from the Champion International Superfund site in Libby, Montana, USA. This microbe, along with some others collected at this site, is able to rapidly mineralize 14C-labeled pyrene. Phylogenetic studies based on the rRNA 16S gene confirmed that strains collected at this site were distinct from one another and also from other known Mycobacterium isolates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008752:3684739:3713465371346537147541290Acidovorax avenae subsp. citrulli AAC00-1, complete genomerestriction modification system DNA specificity domain2e-55216
NC_015422:2126614:2142598214259821440221425Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein3e-52206
NC_007777:4796627:4796627479662747979371311Frankia sp. CcI3, complete genomerestriction modification system DNA specificity domain3e-46186
NC_018645:13408:2450224502257221221Desulfobacula toluolica Tol2, complete genometype-1 restriction enzyme EcoKI specificity protein2e-45184
NC_016830:5994494:6005173600517360065461374Pseudomonas fluorescens F113 chromosome, complete genomeType I restriction-modification system, specificity subunit S9e-44178
NC_020541:1717140:1726398172639817276871290Rhodanobacter sp. 2APBS1, complete genomerestriction endonuclease S subunit6e-43175
NC_008789:1237969:1256434125643412577231290Halorhodospira halophila SL1, complete genomerestriction modification system DNA specificity domain4e-42172
NC_016782:1076619:1083560108356010847531194Corynebacterium diphtheriae 241 chromosome, complete genometype I restriction enzyme, S subunit1e-41171
NC_016786:1079000:1083532108353210847251194Corynebacterium diphtheriae HC01 chromosome, complete genometype I restriction enzyme, S subunit1e-41171
NC_007519:2847816:2856595285659528579411347Desulfovibrio alaskensis G20 chromosome, complete genometype I restriction-modification system, S subunit2e-41170
NC_015576:1442713:145529414552941456130837Mycobacterium sp. JDM601 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-40167
NC_015663:2090442:2112256211225621135961341Enterobacter aerogenes KCTC 2190 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-39164
NC_008702:1:90359035103841350Azoarcus sp. BH72, complete genomeType I site-specific deoxyribonuclease3e-38159
NC_009656:44500:8547085470868641395Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S4e-38159
NC_007484:3035068:3044928304492830463911464Nitrosococcus oceani ATCC 19707, complete genomeRestriction endonuclease S subunits-like1e-37157
NC_013161:4093322:4102957410295741043271371Cyanothece sp. PCC 8802, complete genomerestriction modification system DNA specificity domain protein9e-37154
NC_006350:1084930:1106431110643111077201290Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative type I restriction enzyme specificity protein3e-36153
NC_008740:443274:4727574727574740761320Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain2e-36153
NC_016816:3974895:3974895397489539762801386Pantoea ananatis LMG 5342, complete genometype I restriction-modification system specificity subunit S5e-36152
NC_016816:3952000:3974895397489539762801386Pantoea ananatis LMG 5342, complete genometype I restriction-modification system specificity subunit S5e-36152
NC_009049:1934398:1962148196214819635181371Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencerestriction modification system DNA specificity domain2e-35150
NC_008751:607209:6192036192036205191317Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomerestriction modification system DNA specificity domain2e-35150
NC_015953:2349503:2376073237607323773111239Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-35148
NC_011138:3881446:3898916389891638999981083Alteromonas macleodii 'Deep ecotype', complete genometype I site-specific deoxyribonuclease3e-34146
NC_014253:431942:4581784581784595631386Methanohalobium evestigatum Z-7303 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-34145
NC_013862:27991:4442444258031362Allochromatium vinosum DSM 180 plasmid pALVIN02, complete sequencerestriction modification system DNA specificity domain protein3e-33143
NC_014008:1463795:1483479148347914848221344Coraliomargarita akajimensis DSM 45221 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-33143
NC_008740:257434:2748562748562762411386Marinobacter aquaeolei VT8, complete genomerestriction modification system DNA specificity domain5e-33142
NS_000195:219785:2500322500322513541323Candidatus Cloacamonas acidaminovoransputative Type I restriction-modification system specificity subunit7e-33142
NC_009434:281474:2873472873472886121266Pseudomonas stutzeri A1501, complete genometype I restriction-modification system, S subunit1e-32141
NC_012669:1700626:1710630171063017119131284Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein6e-32139
NC_007908:1108494:1128342112834211295351194Rhodoferax ferrireducens T118, complete genomerestriction modification system DNA specificity domain2e-31137
NC_005966:3334864:3350154335015433515001347Acinetobacter sp. ADP1, complete genomeputative type I restriction-modification system specificity determinant for hsdM and hsdR (HsdS)7e-31135
NC_015572:4618467:4638997463899746404661470Methylomonas methanica MC09 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-31135
NC_014506:157396:1630731630731644011329Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeRestriction endonuclease S subunit2e-30134
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant3e-30133
NC_010498:4856011:4859524485952448608101287Escherichia coli SMS-3-5, complete genometype I restriction modification DNA specificity domain-containing protein4e-30132
NC_015677:1282865:1291978129197812937441767Ramlibacter tataouinensis TTB310 chromosome, complete genometype I restriction- modification, DNA specificity subunit4e-30132
NC_019977:302454:3096423096423111471506Methanomethylovorans hollandica DSM 15978, complete genomerestriction endonuclease S subunit2e-29130
NC_014370:885937:9180299180299193151287Prevotella melaninogenica ATCC 25845 chromosome chromosome I,type I restriction modification DNA specificity domain protein5e-29129
NC_010831:788500:7976347976347989441311Chlorobium phaeobacteroides BS1, complete genomeputative type I restriction-modification system5e-29129
NC_011901:625712:6338466338466352221377Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I restriction-modification system, S subunit4e-29129
NC_015563:4911188:4921644492164449229751332Delftia sp. Cs1-4 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-27124
NC_014973:3452100:3487751348775134891301380Geobacter sp. M18 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein5e-27122
NC_019896:3311000:3323359332335933246391281Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completerestriction modification system DNA specificity domain-containing protein2e-26120
NC_013446:1724000:1729654172965417309431290Comamonas testosteroni CNB-2, complete genomehypothetical protein6e-25115
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain9e-25115
NC_008787:685401:7055047055047067721269Campylobacter jejuni subsp. jejuni 81-176, complete genometype I restriction modification DNA specificity domain protein1e-23111
NC_008942:815280:8215758215758229151341Methanocorpusculum labreanum Z, complete genomehypothetical protein8e-23108
NC_009142:949510:9749529749529761871236Saccharopolyspora erythraea NRRL 2338, complete genomeputative restriction modification system DNA specificity domain6e-23108
NC_006512:696000:6980826980826994281347Idiomarina loihiensis L2TR, complete genomeRestriction endonuclease S subunit1e-22107
NC_014972:247028:2484182484182494911074Desulfobulbus propionicus DSM 2032 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-22107
NC_013861:3341955:3344087334408733454871401Legionella longbeachae NSW150, complete genometype I restriction-modification system (methylase_S)2e-22107
NC_015953:4746983:4757318475731847586491332Streptomyces sp. SirexAA-E chromosome, complete genomeRestriction endonuclease S subunits-like protein3e-22106
NC_014408:1340016:1352967135296713542741308Methanothermobacter marburgensis str. Marburg chromosome, completetype I restriction-modification enzyme, subunit S3e-22106
NC_015434:4640769:4650705465070546519911287Verrucosispora maris AB-18-032 chromosome, complete genomerestriction modification system DNA specificity subunit5e-22106
NC_015164:493159:5474975474975487861290Bacteroides salanitronis DSM 18170 chromosome, complete genomerestriction modification system DNA specificity domain7e-22105
NC_014479:700281:7099167099167112171302Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeType I restriction modification system DNA specificity domain protein (HsdS)6e-21102
NC_015737:449914:4612094612094623541146Clostridium sp. SY8519, complete genomehypothetical protein6e-21102
NC_008255:3331613:3360658336065833619561299Cytophaga hutchinsonii ATCC 33406, complete genomeprobable type I restriction-modification system8e-21102
NC_007086:3805390:3812748381274838140641317Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction endonuclease S subunits1e-20101
NC_010688:3740399:3747058374705837483741317Xanthomonas campestris pv. campestris, complete genomeType I site-specific deoxyribonuclease (specificity subunit)1e-20101
NC_008271:140846:1461601461601473351176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencetype I restriction-modification system specificity subunit2e-20100
NC_013093:1036772:1069664106966410709921329Actinosynnema mirum DSM 43827, complete genomerestriction modification system DNA specificity domain protein3e-20100
NC_008322:2077628:2102612210261221039581347Shewanella sp. MR-7, complete genomerestriction modification system DNA specificity domain7e-2099
NC_012691:2476223:2493223249322324944881266Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein1e-1997.8
NC_012582:1976962:1996805199680519981931389Vibrio cholerae O395 chromosome chromosome I, complete sequencehypothetical protein2e-1997.1
NC_012578:1838470:1859416185941618608041389Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein2e-1997.1
NC_009457:1444449:1465386146538614667741389Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-1997.1
NC_002505:1892430:1912283191228319136711389Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein3e-1997.1
NC_016944:1937645:1958591195859119599191329Vibrio cholerae IEC224 chromosome I, complete sequencetype I restriction enzyme, S subunit3e-1997.1
NC_016445:1363831:1383683138368313850231341Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetype I restriction enzyme, S subunit3e-1997.1
NC_002953:15416:3758837588388981311Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative type I restriction enzyme specificity protein7e-1995.5
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR1e-1894.7
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS1e-1894.7
NC_009943:305854:3181503181503193911242Candidatus Desulfococcus oleovorans Hxd3, complete genomerestriction modification system DNA specificity domain2e-1894.4
NC_020829:1:1056710567119461380Pseudomonas denitrificans ATCC 13867, complete genomeputative type I restriction enzyme, S subunit3e-1893.6
NC_003901:3591500:3598245359824535996271383Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit4e-1893.2
NC_015144:47783:8410884108853311224Weeksella virosa DSM 16922 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-1893.2
NC_017506:1660072:1665738166573816670211284Marinobacter adhaerens HP15 chromosome, complete genometype I site-specific restriction-modification system, S subunit1e-1791.7
NC_009434:695582:729117729117729764648Pseudomonas stutzeri A1501, complete genomehypothetical protein1e-1791.3
NC_011832:913994:9247349247349261491416Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity domain protein5e-1789.4
NC_017195:709098:7177537177537190571305Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetype I restriction-modification system specificity determinant7e-1789
NC_005773:106000:1218821218821232281347Pseudomonas syringae pv. phaseolicola 1448A, complete genometype I restriction-modification system specificity subunit9e-1788.6
NC_010468:4059436:4070347407034740721041758Escherichia coli ATCC 8739, complete genomerestriction modification system DNA specificity domain1e-1688.6
NC_018721:3155579:3166677316667731679571281Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit S HsdS1e-1688.2
NC_013169:1410384:1418952141895214200161065Kytococcus sedentarius DSM 20547, complete genomehypothetical protein1e-1687.8
NC_014366:1435785:1438219143821914393101092Gamma proteobacterium HdN1, complete genome8e-1685.5
NC_002516:3079850:3094757309475730960521296Pseudomonas aeruginosa PAO1, complete genomehypothetical protein9e-1685.1
NC_013515:715009:7417177417177431381422Streptobacillus moniliformis DSM 12112, complete genomerestriction modification system DNA specificity domain protein6e-1479.3
NC_007508:1324000:1333012133301213343311320Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (specificity subunit)6e-1479.3
NC_014632:1112733:1145320114532011466211302Ilyobacter polytropus DSM 2926 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-1479
NC_020156:861402:8652618652618665051245Nonlabens dokdonensis DSW-6, complete genometype I restriction-modification system S(specificity) subunit5e-1272.8
NC_003919:3396136:3402660340266034039401281Xanthomonas axonopodis pv. citri str. 306, complete genometype I restriction-modification system specificity determinant1e-1172
NC_009338:817854:8285608285608296661107Mycobacterium gilvum PYR-GCK chromosome, complete genomerestriction modification system DNA specificity subunit1e-1171.6
NC_009523:907775:9102129102129113901179Roseiflexus sp. RS-1 chromosome, complete genomerestriction modification system DNA specificity subunit1e-1171.6
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein1e-1171.2
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein1e-1171.2
NC_016109:7631165:7638743763874376401401398Kitasatospora setae KM-6054, complete genomehypothetical protein3e-1170.1
NC_014168:2820315:2831141283114128324901350Segniliparus rotundus DSM 44985 chromosome, complete genomerestriction endonuclease S subunit-like protein6e-1168.9
NC_009953:3224412:3233728323372832349661239Salinispora arenicola CNS-205 chromosome, complete genomerestriction endonuclease S subunits-like protein7e-1168.9
NC_016147:1961000:197630919763091977286978Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeRestriction endonuclease S subunits-like protein9e-1168.6
NC_014217:2760898:2785685278568527872051521Starkeya novella DSM 506 chromosome, complete genomeRestriction endonuclease S subunits-like protein1e-1068.2
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit3e-1066.6
NC_016590:1380092:1386288138628813874661179Burkholderia sp. YI23 chromosome 3, complete sequencerestriction endonuclease S subunits-like protein8e-1065.5
NC_011832:1122268:113313511331351133677543Candidatus Methanosphaerula palustris E1-9c, complete genomerestriction modification system DNA specificity subunit2e-0964.3
NC_021177:7462000:7473467747346774763822916Streptomyces fulvissimus DSM 40593, complete genomeN-6 DNA methylase2e-0963.9
NC_016902:4236680:4251283425128342524491167Escherichia coli KO11FL chromosome, complete genomerestriction modification system DNA specificity domain-containing protein4e-0963.2
CP002516:4236680:4251283425128342524491167Escherichia coli KO11, complete genomerestriction modification system DNA specificity domain protein4e-0963.2
NC_014034:1036652:1048875104887510505001626Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S4e-0963.2
CP002185:4750571:4760420476042047614871068Escherichia coli W, complete genomehypothetical protein5e-0962.8
NC_019902:1863162:1874009187400918753281320Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, specificity subunit S9e-0962
NC_014216:2334568:2339611233961123409301320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein3e-0860.5
NC_014365:2810405:2832411283241128336461236Desulfarculus baarsii DSM 2075 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-0859.7
NC_019907:773944:782100782100782702603Liberibacter crescens BT-1 chromosome, complete genomeType I restriction-modification system, specificity subunit S4e-0859.7
NC_014640:6815264:6824393682439368255951203Achromobacter xylosoxidans A8 chromosome, complete genometype I restriction enzyme StySPI specificity protein4e-0859.7
NC_016051:1005188:1012531101253110138171287Thermococcus sp. AM4 chromosome, complete genomeType I restriction-modification system specificity subunit S5e-0859.3
NC_003902:3430051:3445487344548734467341248Xanthomonas campestris pv. campestris str. ATCC 33913, completetype I restriction enzyme specificity chain-like protein8e-0858.5
NC_010688:1435694:1442200144220014434471248Xanthomonas campestris pv. campestris, complete genometype I site-specific DNA methyltransferase specificity subunit8e-0858.5
NC_007086:1457531:1464058146405814653051248Xanthomonas campestris pv. campestris str. 8004, complete genometype I restriction enzyme (specificity chain) homolog8e-0858.5
NC_007404:2743877:2758249275824927594511203Thiobacillus denitrificans ATCC 25259, complete genomeputative restriction endonuclease S subunit9e-0858.5
NC_007413:1405817:1418019141801914193831365Anabaena variabilis ATCC 29413, complete genomeRestriction modification system DNA specificity domain1e-0758.5
NC_008639:1573971:1587158158715815888311674Chlorobium phaeobacteroides DSM 266, complete genomerestriction modification system DNA specificity domain1e-0758.2
NC_015167:3469968:3477926347792634791551230Cellulophaga lytica DSM 7489 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-0757.4
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein9e-0755.5
NC_014366:1435785:143932614393261439565240Gamma proteobacterium HdN1, complete genome9e-0755.5
NC_014206:2807879:2818599281859928200561458Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0655.1
NC_007925:4060635:4066717406671740680991383Rhodopseudomonas palustris BisB18, complete genometype I restriction enzyme StySPI specificity protein1e-0655.1
NC_009634:299327:3072993072993085221224Methanococcus vannielii SB chromosome, complete genomerestriction modification system DNA specificity subunit5e-0652.8