Pre_GI: BLASTP Hits

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Query: NC_009012:1934107:1965665 Clostridium thermocellum ATCC 27405, complete genome

Start: 1965665, End: 1966963, Length: 1299

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein0894
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein0889
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase0884
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase0878
NC_014328:303063:3623603623603636041245Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative methylase6e-92338
NC_014393:937000:9529689529689542211254Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-91336
NC_010320:1268355:1285298128529812865361239Thermoanaerobacter sp. X514 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-87322
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease6e-86318
NC_011898:3367457:3396191339619133974321242Clostridium cellulolyticum H10, complete genomeDNA methylase N-4/N-6 domain protein2e-85317
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase2e-85317
NC_009706:2673906:2721831272183127230721242Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase1e-85317
NC_003909:386880:4081694081694094101242Bacillus cereus ATCC 10987, complete genomeDNA methylase, family protein8e-86317
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase3e-85315
NC_015520:2974048:2990245299024529914981254Mahella australiensis 50-1 BON chromosome, complete genomeParB domain-containing protein nuclease9e-85314
NC_016633:3069518:3099711309971131009551245Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA modification methylase1e-84314
NC_014410:800500:8099698099698112221254Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein1e-84313
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase4e-79295
NC_009633:4097536:4125793412579341270281236Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-75282
NC_008530:1454118:1470694147069414719201227Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain and DNA modification methylase domain7e-74278
NC_012491:3736167:3742439374243937437371299Brevibacillus brevis NBRC 100599, complete genomehypothetical protein2e-73276
NC_015697:468234:4808454808454820711227Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase9e-73274
NC_007432:654904:6757886757886770261239Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA methylase1e-69263
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-68e-65248
NC_020207:1170000:1176467117646711776661200Enterococcus faecium NRRL B-2354, complete genomeDNA methylase8e-65248
NC_010337:2848360:2893873289387328951051233Heliobacterium modesticaldum Ice1, complete genomeDNA methylase2e-47190
NC_009659:3103601:3102180310218031036041425Janthinobacterium sp. Marseille chromosome, complete genomephage related DNA methyltransferase8e-47188
NC_011420:36272:4740747407487921386Rhodospirillum centenum SW, complete genomeDNA methylase, putative3e-46186
NC_004557:2037500:2054930205493020560031074Clostridium tetani E88, complete genomechromosome partitioning parB family protein2e-45183
NC_009633:2592000:2615672261567226169461275Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-45181
NC_011420:36272:4879748797500351239Rhodospirillum centenum SW, complete genomeDNA methylase, putative6e-45181
NC_015422:2078618:2107316210731621087311416Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-44180
NC_016641:2587000:2603244260324426045091266Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-43176
NC_015422:2078618:2108728210872821099901263Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-43175
NC_013722:2848366:2849628284962828509261299Xanthomonas albilineans, complete genomeputative adn methyltransferase protein2e-42173
NC_009659:3103601:3103601310360131048361236Janthinobacterium sp. Marseille chromosome, complete genomeDNA modification methylase2e-42173
NC_009617:1897887:1913872191387219151041233Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-39164
NC_014393:4775452:4810611481061148118671257Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-39164
NC_010804:996837:1034583103458310358481266Burkholderia multivorans ATCC 17616 chromosome 1, completeputative DNA methylase4e-39162
NC_010084:2484000:2488925248892524901901266Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein4e-39162
NC_002978:234082:2486082486082498371230Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW1, DNA methylase3e-39162
NC_003212:1713958:1740897174089717422341338Listeria innocua Clip11262, complete genomehypothetical protein2e-38160
NC_012416:573202:5984745984745997001227Wolbachia sp. wRi, complete genomeDNA methylase5e-38159
NC_012416:1079661:1104933110493311061591227Wolbachia sp. wRi, complete genomeDNA methylase5e-38159
NC_010981:1371265:1388212138821213894441233Wolbachia pipientis, complete genomePhage related DNA methylase7e-38158
NC_010981:242500:2620412620412632731233Wolbachia pipientis, complete genomePhage related DNA methylase7e-38158
NC_010981:314745:3355613355613367931233Wolbachia pipientis, complete genomePhage related DNA methylase7e-38158
NC_002978:549454:5722595722595734851227Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW4, DNA methylase1e-37157
NC_016625:1259778:1260363126036312616371275Burkholderia sp. YI23 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain-containing protein5e-37155
NC_002737:533291:5450875450875462531167Streptococcus pyogenes M1 GAS, complete genomeconserved hypothetical protein, phage associated5e-36152
NC_016026:1969766:1978706197870619800371332Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDNA methylase family protein8e-36151
NC_009511:1746631:1754713175471317561641452Sphingomonas wittichii RW1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-35150
NC_014483:3339926:334542833454283345886459Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator4e-34145
NC_012471:141463:1552281552281563941167Streptococcus equi subsp. equi 4047, complete genomephage DNA methylase3e-33142
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein1e-32141
NC_010084:2484000:2487717248771724889281212Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein3e-32140
NC_010804:996837:1035845103584510370501206Burkholderia multivorans ATCC 17616 chromosome 1, complete3e-32139
NC_008751:1043269:1077549107754910796032055Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeParB domain protein nuclease1e-31138
NC_014365:2843126:2846724284672428479111188Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease1e-31137
NC_015593:1587684:1590233159023315915491317Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein2e-31137
NC_017082:532000:5490945490945503591266Bradyrhizobium sp. S23321, complete genomehypothetical protein2e-31137
NC_008358:2638245:2697509269750926988611353Hyphomonas neptunium ATCC 15444, complete genomeDNA methylase2e-31136
NC_014632:1112733:1138770113877011400261257Ilyobacter polytropus DSM 2926 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-30133
NC_014365:2888897:2887701288770128889001200Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease5e-30132
NC_010644:1039576:1058326105832610595161191Elusimicrobium minutum Pei191, complete genomenuclease4e-28126
NC_012988:769981:8472298472298487131485Methylobacterium extorquens DM4, complete genomephage methyltransferase2e-27124
NC_012491:1187864:120306612030661203548483Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-27124
NC_010172:798923:8671778671778686431467Methylobacterium extorquens PA1, complete genomeDNA methylase N-4/N-6 domain protein4e-27122
NC_003296:673790:710925710925711593669Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein4e-26119
NC_014310:1822751:186556618655661866315750Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein1e-23111
NC_020207:1906803:191206119120611912357297Enterococcus faecium NRRL B-2354, complete genomeDNA methylase6e-23108
NC_011386:931140:9565829565829579871406Oligotropha carboxidovorans OM5, complete genome3e-22106
NC_011958:976500:1005431100543110068071377Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA modification methylase1e-21104
NC_010163:614634:629457629457630335879Acholeplasma laidlawii PG-8A chromosome, complete genomeDNA modification methylase1e-21104
NC_015519:2489728:249187024918702492383514Tepidanaerobacter sp. Re1 chromosome, complete genome9e-2098.6
NC_013790:406681:417460417460418080621Methanobrevibacter ruminantium M1 chromosome, complete genomeParB-like nuclease domain-containing protein4e-1996.3
NC_014217:3024961:303590830359083036861954Starkeya novella DSM 506 chromosome, complete genomehypothetical protein7e-1995.5
NC_013665:2176502:219282221928222193739918Methanocella paludicola SANAE, complete genomeputative DNA methylase1e-1894.4
NC_011958:976500:100417210041721005065894Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-62e-1894.4
NC_012526:300126:3174953174953185081014Deinococcus deserti VCD115, complete genomeputative DNA methylase8e-1788.6
NC_016025:596670:6064136064136074531041Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase2e-1687.8
NC_011831:4043802:4052982405298240540251044Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein5e-1685.9
NC_002578:877609:889774889774890703930Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein1e-1378.2
NC_011958:976500:100507210050721005434363Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-62e-1377.4
NC_016025:65923:724357243573424990Candidatus Chloracidobacterium thermophilum B chromosome chromosomeDNA modification methylase4e-1376.3
NC_011831:2728932:274050127405012741490990Chloroflexus aggregans DSM 9485, complete genomeDNA methylase N-4/N-6 domain protein3e-1273.6
NC_015562:1816000:183292918329291833705777Methanotorris igneus Kol 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-1273.6
NC_013926:1009718:1012026101202610145752550Aciduliprofundum boonei T469 chromosome, complete genomeDNA methylase N-4/N-6 domain protein7e-1272.4
NC_010831:40000:4454244542458671326Chlorobium phaeobacteroides BS1, complete genomeDNA methylase N-4/N-6 domain protein7e-1272
NC_009615:1001744:101259610125961013336741Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA methylase1e-1171.6
NC_009718:579291:580462580462581316855Fervidobacterium nodosum Rt17-B1, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-1171.2
NC_006270:2850354:285968328596832860039357Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1170.5
NC_006322:2851215:286054328605432860899357Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1170.5
NC_014034:1036652:103761910376191038395777Rhodobacter capsulatus SB1003 chromosome, complete genomeParB domain-containing protein nuclease3e-1170.1
NC_015311:2626850:2653783265378326550721290Prevotella denticola F0289 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase4e-1169.7
NC_008563:1475500:148710414871041487895792Escherichia coli APEC O1, complete genomeputative transcriptional regulator6e-1169.3
NC_016902:2580774:258429925842992585087789Escherichia coli KO11FL chromosome, complete genomeParB domain-containing protein nuclease8e-1168.6
CP002516:2580774:258429925842992585087789Escherichia coli KO11, complete genomeParB domain protein nuclease8e-1168.6
NC_014246:1457992:1469749146974914709661218Mobiluncus curtisii ATCC 43063 chromosome, complete genomeputative site-specific DNA-methyltransferase1e-1067.8
NC_009513:870837:884638884638885417780Lactobacillus reuteri F275, complete genomeParB domain protein nuclease2e-1067.4
NC_010609:880196:894015894015894776762Lactobacillus reuteri JCM 1112, complete genomehypothetical protein2e-1067.4
NC_007514:1475323:1486323148632314875641242Chlorobium chlorochromatii CaD3, complete genomeDNA modification methylase-like2e-1067.4
NC_020134:1328302:1335275133527513363421068Clostridium stercorarium subsp. stercorarium DSM 8532, completemodification methylase MthZI5e-1066.2
NC_019962:2129393:2129393212939321304391047Natrinema pellirubrum DSM 15624, complete genomeDNA modification methylase6e-1065.9
NC_014738:2094000:212156121215612122286726Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase5e-1065.9
NC_017045:119046:126810126810127535726Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase5e-1065.9
NC_017082:532000:551466551466552002537Bradyrhizobium sp. S23321, complete genomehypothetical protein7e-1065.5
NC_007508:1221500:124360012436001244499900Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeSite-specific DNA-methyltransferase (cytosine-N(4)-specific)2e-0964.3
NC_011769:247202:2560562560562572551200Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeDNA methylase N-4/N-6 domain protein2e-0963.9
NC_015558:1813500:1821200182120018223001101Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein2e-0963.9
NC_014314:69872:792407924080220981Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA methylase N-4/N-6 domain-containing protein3e-0963.5
NC_017190:2130651:216542221654222166258837Bacillus amyloliquefaciens LL3 chromosome, complete genomeDNA modification methylase4e-0963.2
NS_000195:526983:528804528804529706903Candidatus Cloacamonas acidaminovoransputative Site-specific DNA-methyltransferase (cytosine-N(4)-specific)5e-0962.8
NC_014933:2240000:2256052225605222578061755Bacteroides helcogenes P 36-108 chromosome, complete genomeDNA methylase N-4/N-6 domain protein1e-0861.6
NC_017188:1172181:126806612680661268905840Bacillus amyloliquefaciens TA208 chromosome, complete genomeModification methylase BamHII1e-0861.6
NC_017191:1173989:126964312696431270482840Bacillus amyloliquefaciens XH7 chromosome, complete genomemodification methylase BamHII1e-0861.6
NC_011770:1431740:144026814402681441263996Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-61e-0861.2
NC_011770:2690501:269578726957872696728942Pseudomonas aeruginosa LESB58, complete genomeDNA methylase N-4/N-62e-0861.2
NC_009089:1283000:130570513057051306664960Clostridium difficile 630, complete genomemodification DNA methylase2e-0860.8
NC_011979:646518:656035656035656937903Geobacter sp. FRC-32, complete genomeDNA methylase N-4/N-6 domain protein2e-0860.8
NC_007181:1766910:178808617880861788946861Sulfolobus acidocaldarius DSM 639, complete genomemodification methylase2e-0860.8
NC_017186:7822448:783281978328197833625807Amycolatopsis mediterranei S699 chromosome, complete genomeadenine-specific DNA-methyltransferase3e-0860.1
NC_014318:7821227:783277378327737833579807Amycolatopsis mediterranei U32 chromosome, complete genomeputative adenine-specific DNA-methyltransferase3e-0860.1
NC_007759:2858240:2865046286504628661311086Syntrophus aciditrophicus SB, complete genometype II restriction-modification system methylation subunit4e-0859.7
NC_013552:1187299:119226411922641192899636Dehalococcoides sp. VS, complete genomehypothetical protein8e-0858.9
NC_020387:1257163:126161612616161262251636Dehalococcoides mccartyi BTF08, complete genomeParB-like nuclease domain-containing protein8e-0858.9
NC_013890:1142500:114650911465091147144636Dehalococcoides sp. GT chromosome, complete genomeParB domain protein nuclease8e-0858.9
NC_008278:2972323:298386729838672984580714Frankia alni ACN14a, complete genomehypothetical protein9e-0858.5
NC_009253:897684:919365919365920264900Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein9e-0858.5
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase1e-0758.2
NC_008021:1401249:140520014052001406051852Streptococcus pyogenes MGAS9429, complete genomeadenine-specific methyltransferase4e-0756.6
NC_008023:1426687:142909014290901429941852Streptococcus pyogenes MGAS2096, complete genomeAdenine-specific methyltransferase4e-0756.6
NC_007297:1406796:141074714107471411598852Streptococcus pyogenes MGAS5005, complete genomeadenine-specific methyltransferase4e-0756.6
NC_012490:43000:541995419955074876Rhodococcus erythropolis PR4, complete genomeDNA methyltransferase4e-0756.6
NC_018604:758819:762103762103763008906Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0756.6
NC_020387:1257163:128225112822511282886636Dehalococcoides mccartyi BTF08, complete genomeParB-like nuclease domain-containing protein4e-0756.2
NC_008825:2525380:254891425489142549837924Methylibium petroleiphilum PM1, complete genomeDNA modification methylase-like protein5e-0756.2
NC_014311:2606434:262127426212742621693420Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein6e-0755.8
NC_012471:781063:795598795598796308711Streptococcus equi subsp. equi 4047, complete genomeDNA methylase7e-0755.8
NC_013890:1142500:116059911605991161234636Dehalococcoides sp. GT chromosome, complete genomeParB domain protein nuclease7e-0755.5
NC_008278:2972323:298769929876992988469771Frankia alni ACN14a, complete genomehypothetical protein1e-0655.1
NC_015500:78223:9353393533947321200Treponema brennaborense DSM 12168 chromosome, complete genomeDNA methylase N-4/N-6 domain protein1e-0654.7
NC_015573:813000:8142908142908156331344Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0654.7
NC_015063:1:166811668117325645Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceDNA methylase N-4/N-6 domain protein2e-0654.3
NC_012914:1851102:1877054187705418781301077Paenibacillus sp. JDR-2, complete genomeDNA methylase N-4/N-6 domain protein3e-0653.5
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase4e-0653.1
NC_009708:2537557:254313325431332543642510Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeParB family protein4e-0653.1
NC_012590:2117027:214046021404602141245786Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein4e-0653.1
NC_007356:1165760:116891111689111169546636Dehalococcoides sp. CBDB1, complete genomehypothetical protein9e-0652
NC_020126:7255111:727680772768077277688882Myxococcus stipitatus DSM 14675, complete genomeadenine-specific DNA methyltransferase9e-0652