Pre_GI: BLASTP Hits

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Query: NC_008593:841291:844964 Clostridium novyi NT, complete genome

Start: 844964, End: 845491, Length: 528

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:906969:910650910650911177528Clostridium botulinum BKT015925 chromosome, complete genomehypothetical protein1e-53208
NC_009697:2680607:269604226960422696617576Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein5e-33140
NC_012563:2979147:299721829972182997793576Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein5e-33140
NC_010674:2930259:294582229458222946385564Clostridium botulinum B str. Eklund 17B, complete genomehypothetical protein2e-2098.6
NC_010723:2735196:275013527501352750698564Clostridium botulinum E3 str. Alaska E43, complete genomehypothetical protein8e-2096.3
NC_008262:1795914:180821218082121808814603Clostridium perfringens SM101, complete genomehypothetical protein3e-1581.3
NC_003366:1901898:191884919188491919451603Clostridium perfringens str. 13, complete genomehypothetical protein4e-1580.9
NC_008261:2117207:213416221341622134764603Clostridium perfringens ATCC 13124, complete genomehypothetical protein8e-1579.7