Pre_GI: BLASTP Hits

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Query: NC_008278:874015:888614 Frankia alni ACN14a, complete genome

Start: 888614, End: 889249, Length: 636

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016887:3255500:3255638325563832572721635Nocardia cyriacigeorgica GUH-2, complete genomeSerine/threonine protein kinase1e-42172
NC_013093:3068486:309714630971463097826681Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family5e-35147
NC_014210:2372813:238542723854272386074648Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,two component transcriptional regulator, LuxR family7e-35147
NC_019673:1039258:105072310507231051367645Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LuxR family5e-33140
NC_017186:1320186:133640213364021337043642Amycolatopsis mediterranei S699 chromosome, complete genometwo-component system response regulator6e-33140
NC_014318:1320170:133638613363861337018633Amycolatopsis mediterranei U32 chromosome, complete genometwo-component system response regulator1e-32139
NC_013093:1036772:105286410528641053508645Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family3e-32138
NC_013757:2630000:264637226463722647019648Geodermatophilus obscurus DSM 43160, complete genometwo component transcriptional regulator, LuxR family3e-32138
NC_008278:81866:902369023690880645Frankia alni ACN14a, complete genometwo-component system response regulator8e-31133
NC_015312:6717973:671797367179736718620648Pseudonocardia dioxanivorans CB1190 chromosome, complete genometwo component LuxR family transcriptional regulator2e-29129
NC_013093:3157897:317696831769683177612645Actinosynnema mirum DSM 43827, complete genometwo component transcriptional regulator, LuxR family6e-27120
NC_013929:6371019:639271463927146393367654Streptomyces scabiei 87.22 chromosome, complete genometwo-component system response regulator9e-25113
NC_006087:2008000:201252920125292013200672Leifsonia xyli subsp. xyli str. CTCB07, complete genometwo-component system, regulatory protein1e-23110
NC_014210:5048502:507248350724835073160678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,two component transcriptional regulator, LuxR family4e-1477.8
NC_014355:3951855:395227139522713952915645Candidatus Nitrospira defluvii, complete genomeLuxR family response regulator9e-1373.6
NC_008278:4023918:405790440579044058539636Frankia alni ACN14a, complete genomeputative two-component system response regulator3e-1168.6
NC_016582:6811273:682559468255946826280687Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator1e-1067
NC_008025:1799106:181593418159341816599666Deinococcus geothermalis DSM 11300, complete genometwo component transcriptional regulator, LuxR family5e-1064.3
NC_008148:1567703:156992315699231570585663Rubrobacter xylanophilus DSM 9941, complete genometwo component transcriptional regulator, LuxR family2e-0962.8
NC_014960:1910202:1930138193013819312051068Anaerolinea thermophila UNI-1, complete genomeputative NarL family two-component system response regulator2e-0962.4
NC_015161:162000:165219165219165887669Deinococcus proteolyticus MRP chromosome, complete genometwo component transcriptional regulator, LuxR family3e-0962
NC_013595:196493:215303215303216028726Streptosporangium roseum DSM 43021, complete genomeresponse regulator receiver protein3e-0962
NC_007793:2510801:251179925117992512452654Staphylococcus aureus subsp. aureus USA300, complete genometranscriptional regulator, DegU family4e-0961.6
NC_002953:2435667:244029424402942440947654Staphylococcus aureus subsp. aureus MSSA476, complete genomeputative response regulator4e-0961.6
NC_002951:2448000:244823224482322448885654Staphylococcus aureus subsp. aureus COL, complete genometranscriptional regulatory protein DegU, putative4e-0961.6
NC_017338:2456000:245638824563882457041654Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeLuxR family two component transcriptional regulator4e-0961.6
NC_007622:2399347:240034424003442400997654Staphylococcus aureus RF122, complete genometwo-component response regulator4e-0961.6
NC_002952:2550500:255266825526682553321654Staphylococcus aureus subsp. aureus MRSA252, complete genomeputative response regulator4e-0961.6
NC_002758:2515310:251873925187392519392654Staphylococcus aureus subsp. aureus Mu50, complete genomeresponse regulators of two-component regulatory4e-0961.6
NC_003923:2460130:246112824611282461781654Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein4e-0961.6
NC_009782:2519379:252037725203772521030654Staphylococcus aureus subsp. aureus Mu3, complete genomehypothetical protein4e-0961.6
NC_002745:2446722:244772024477202448373654Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein4e-0961.6
NC_010079:2510951:251194925119492512602654Staphylococcus aureus subsp. aureus USA300_TCH1516, completetranscriptional regulator4e-0961.6
NC_009632:2545419:254884825488482549501654Staphylococcus aureus subsp. aureus JH1 chromosome, completeresponse regulator receiver4e-0961.6
NC_009641:2513300:251673025167302517383654Staphylococcus aureus subsp. aureus str. Newman chromosome,transcriptional regulator DegU family protein4e-0961.6
NC_016912:2329113:233011123301112330764654Staphylococcus aureus subsp. aureus VC40 chromosome, completeDegU family transcriptional regulator4e-0961.6
NC_013406:5020690:502420850242085024816609Paenibacillus sp. Y412MC10 chromosome, complete genomeLuxR family two component transcriptional regulator4e-0961.6
NC_013406:6568273:659406765940676594789723Paenibacillus sp. Y412MC10 chromosome, complete genomeLuxR family two component transcriptional regulator1e-0859.7
NC_019771:1356000:136497313649731365605633Anabaena cylindrica PCC 7122, complete genometwo component transcriptional regulator, LuxR family2e-0859.3
NC_016941:2395502:239731123973112397964654Staphylococcus aureus subsp. aureus MSHR1132, complete genomeoxygen regulatory protein NreC2e-0859.3
NC_013929:1119384:113330611333061133971666Streptomyces scabiei 87.22 chromosome, complete genometwo-component system response regulator4e-0858.2
NC_004461:2002000:200398020039802004636657Staphylococcus epidermidis ATCC 12228, complete genomeresponse regulators of two-component regulatory4e-0858.2
NC_007005:2191500:221341922134192214087669Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LuxR:Response regulator receiver5e-0857.8
NC_007907:5185510:524467952446795245317639Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0857.8
NC_015683:2469481:247103224710322471670639Corynebacterium ulcerans BR-AD22 chromosome, complete genometwo-component system transcriptional regulator9e-0857
NC_006322:2658587:267722626772262677870645Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-0757
NC_006270:2657726:267636626763662677010645Bacillus licheniformis ATCC 14580, complete genometwo-component response regulator1e-0757
NC_014019:3543389:356123635612363561808573Bacillus megaterium QM B1551 chromosome, complete genomeethanolamine two-component response regulator2e-0756.2
NC_016887:2269177:229490122949012295518618Nocardia cyriacigeorgica GUH-2, complete genomeresponse regulator, two-component system2e-0755.8
NC_007168:665284:682342682342682995654Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0755.8
NC_018870:705900:721403721403721999597Thermacetogenium phaeum DSM 12270 chromosome, complete genometranscriptional regulatory protein2e-0755.8
NC_011830:1288984:130235713023571302995639Desulfitobacterium hafniense DCB-2, complete genometwo component transcriptional regulator, LuxR family2e-0755.8
NC_011593:533884:541791541791542534744Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,two component transcriptional regulator, LuxR family3e-0755.5
NC_008705:3201817:321045032104503211082633Mycobacterium sp. KMS, complete genomeresponse regulator receiver and ANTAR domain protein3e-0755.5
NC_019970:2080419:2097771209777120988261056Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain4e-0754.7
NC_017219:538864:541584541584542315732Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative two-component response regulator5e-0754.7
NC_008148:2498000:252802925280292528718690Rubrobacter xylanophilus DSM 9941, complete genometwo component transcriptional regulator, LuxR family6e-0754.3
NC_009664:4423829:449317644931764493853678Kineococcus radiotolerans SRS30216, complete genometwo component transcriptional regulator, LuxR family6e-0754.3
NC_013192:63111:755777557776155579Leptotrichia buccalis DSM 1135, complete genomeresponse regulator receiver and ANTAR domain protein5e-0754.3
NC_010725:3992948:399503339950333995698666Methylobacterium populi BJ001, complete genometwo component transcriptional regulator, LuxR family7e-0753.9
NC_018581:3202281:320818632081863208809624Gordonia sp. KTR9 chromosome, complete genomeResponse regulator7e-0753.9
NC_018750:6132619:615907761590776159742666Streptomyces venezuelae ATCC 10712, complete genomeDNA-binding response regulator, LuxR family1e-0653.1
NC_014246:676570:680373680373680978606Mobiluncus curtisii ATCC 43063 chromosome, complete genomeresponse regulator2e-0652.8
NC_015953:46732:811198111981724606Streptomyces sp. SirexAA-E chromosome, complete genomeLuxR family two component transcriptional regulator2e-0652.8
NC_012660:3179980:320614832061483206801654Pseudomonas fluorescens SBW25 chromosome, complete genomeputative two-component system response regulator2e-0652.8
NC_010617:774914:777404777404778015612Kocuria rhizophila DC2201, complete genomeNarL family two-component response regulator2e-0652.4
NC_011886:1891077:191480819148081915482675Arthrobacter chlorophenolicus A6, complete genomeresponse regulator receiver protein4e-0651.6
NC_019897:329945:362898362898363503606Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain3e-0651.6
NC_012918:2277500:228645922864592287109651Geobacter sp. M21 chromosome, complete genomeLuxR family transcriptional regulator4e-0651.2
NC_016641:945284:962368962368963090723Paenibacillus terrae HPL-003 chromosome, complete genomeDegU family transcriptional regulator5e-0651.2
NC_013216:3907497:391877139187713919421651Desulfotomaculum acetoxidans DSM 771, complete genometwo component transcriptional regulator, LuxR family8e-0650.4
NC_017179:2067015:207157120715712072146576Clostridium difficile BI1, complete genometwo-component response regulator9e-0650.4
NC_013315:2059007:206356320635632064138576Clostridium difficile CD196 chromosome, complete genometwo-component response regulator9e-0650.4
NC_018720:993869:101301410130141013688675Bifidobacterium asteroides PRL2011 chromosome, complete genometwo component transcriptional regulator, LuxR family9e-0650.4
NC_002607:742886:7418467418467428891044Halobacterium sp. NRC-1, complete genomeCheB1e-0550.1