Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:81866 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
81866830801215putative aspartate aminotransferaseQuickGO ontologyBLASTP
8308183965885putative Manganese ABC transporter permease proteinQuickGO ontologyBLASTP
8396284774813putative Manganese transport system membrane proteinQuickGO ontologyBLASTP
8481085568759Manganese transport system ATP-binding proteinQuickGO ontologyBLASTP
8561286118507hypothetical protein putative lipoproteinQuickGO ontologyBLASTP
8619086753564hypothetical protein putative signal peptideQuickGO ontology
8680287359558hypothetical protein
8778188122342hypothetical proteinBLASTP
8810188379279hypothetical proteinBLASTP
88596898191224hypothetical proteinBLASTP
9023690880645two-component system response regulatorQuickGO ontologyBLASTP
9120191689489hypothetical protein
9183792493657hypothetical proteinBLASTP
92498942071710putative transport integral membrane protein putative Copper resistance domainQuickGO ontologyBLASTP
94218956751458putative RNA polymerase sigma factorQuickGO ontologyBLASTP
96156972741119putative serine protease heat shock proteinQuickGO ontologyBLASTP
9801898413396mechanosensitive channelQuickGO ontologyBLASTP
992921006321341hypothetical protein putative IMP dehydrogenaseQuickGO ontologyBLASTP
1006461016681023putative LpqP HydrolaseesteraseQuickGO ontologyBLASTP
101819102166348hypothetical protein putative coiled-coil domainQuickGO ontologyBLASTP