Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:6371019 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
637101963722271209sugar kinaseQuickGO ontologyBLASTP
63725316373418888hypothetical proteinBLASTP
63736456374424780NagD-like phosphataseQuickGO ontologyBLASTP
63746186375289672hypothetical protein
63752976376013717sortaseQuickGO ontologyBLASTP
637654963775891041O-glycosylhydrolaseQuickGO ontologyBLASTP
637775263796891938hypothetical proteinBLASTP
637968663816831998hypothetical proteinBLASTP
63823176382763447hypothetical proteinBLASTP
63828196383454636hypothetical proteinBLASTP
63835836384218636hypothetical proteinBLASTP
63842216384748528hypothetical proteinBLASTP
638475263870792328hypothetical proteinBLASTP
638727263884291158hypothetical proteinBLASTP
63885266389143618chitin binding proteinQuickGO ontologyBLASTP
63892636389733471hypothetical protein
638977463914201647AMP-binding proteinQuickGO ontologyBLASTP
639149163927291239two-component system sensor kinaseQuickGO ontologyBLASTP
63927146393367654two-component system response regulatorQuickGO ontologyBLASTP
63936916394449759IclR family transcriptional regulatorQuickGO ontologyBLASTP