Pre_GI: BLASTP Hits

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Query: NC_008269:577111:586055 Rhodococcus sp. RHA1 plasmid pRHL1, complete sequence

Start: 586055, End: 586396, Length: 342

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013159:3858425:387137438713743871721348Saccharomonospora viridis DSM 43017, complete genomehypothetical protein2e-21100
NC_009479:34001:391133911339457345Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidconserved hypothetical protein, similar to LSR2 protein3e-1890.5
NC_017955:3731480:378958737895873789943357Modestobacter marinus, complete genomelysyl tRNA synthetase-like protein6e-1889.4
NC_014158:233733:252079252079252414336Tsukamurella paurometabola DSM 20162 chromosome, complete genomeprotein lsr2 precursor7e-1889.4
NC_007333:3360000:337544033754403375772333Thermobifida fusca YX, complete genomeputative Lsr2-like protein2e-1787.4
NC_010408:79855:816781678514348Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1,LSR2-family protein9e-1785.5
NC_019673:359540:370326370326370673348Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-1683.2
NC_018681:5490963:552737855273785527713336Nocardia brasiliensis ATCC 700358 chromosome, complete genomeLSR2 protein8e-1682.4
NC_010407:3132683:313907731390773139412336Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative Lsr2-like protein3e-1580.5
NC_015953:3159234:317231231723123172647336Streptomyces sp. SirexAA-E chromosome, complete genomeputative Lsr2-like protein9e-1579
NC_016943:4692561:470411747041174704422306Blastococcus saxobsidens DD2, complete genomehypothetical protein2e-1477.8
NC_016109:5768000:580537758053775805706330Kitasatospora setae KM-6054, complete genomeputative LSR2-like protein3e-1477
NC_015683:2469481:247065524706552470975321Corynebacterium ulcerans BR-AD22 chromosome, complete genomemultifunctional histone-like protein3e-1373.6
NC_009953:3552738:355638835563883556738351Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein5e-1373.2
NC_013235:2902617:292474329247432925084342Nakamurella multipartita DSM 44233, complete genomehypothetical protein1e-1272
NC_013757:729986:766869766869767198330Geodermatophilus obscurus DSM 43160, complete genomeputative Lsr2-like protein1e-1271.6
NC_013757:3613438:362842536284253628754330Geodermatophilus obscurus DSM 43160, complete genomeLSR2-like protein1e-1168.6
NC_009664:4696961:474378547437854744369585Kineococcus radiotolerans SRS30216, complete genomehypothetical protein2e-1168.2
NC_016582:6448430:646057764605776460909333Streptomyces bingchenggensis BCW-1 chromosome, complete genomeLsr2-like protein3e-1167
NC_009921:593665:612581612581612922342Frankia sp. EAN1pec, complete genomeputative lysyl tRNA synthetase-like protein4e-1167
NC_009921:8215996:822883182288318229172342Frankia sp. EAN1pec, complete genomeputative lysyl tRNA synthetase-like protein6e-1166.2
NC_016111:1766010:181909318190931819431339Streptomyces cattleya NRRL 8057, complete genomeProtein lsr29e-1165.5
NC_013757:3100515:310812831081283108463336Geodermatophilus obscurus DSM 43160, complete genomeiron-regulated LSR2 protein precursor2e-1064.3
NC_006085:308567:326113326113326430318Propionibacterium acnes KPA171202, complete genomehypothetical protein2e-1064.3
NC_014039:334892:352411352411352728318Propionibacterium acnes SK137 chromosome, complete genomehypothetical protein2e-1064.3
NC_016511:308244:325736325736326053318Propionibacterium acnes TypeIA2 P.acn31 chromosome, completehypothetical protein2e-1064.3
NC_016512:305240:325099325099325416318Propionibacterium acnes TypeIA2 P.acn17 chromosome, completehypothetical protein2e-1064.3
NC_016516:300846:316533316533316850318Propionibacterium acnes TypeIA2 P.acn33 chromosome, completehypothetical protein2e-1064.3
NC_013757:1212308:124034012403401240675336Geodermatophilus obscurus DSM 43160, complete genomeiron-regulated LSR2 protein precursor3e-1063.5
NC_018681:5695343:569814956981495698484336Nocardia brasiliensis ATCC 700358 chromosome, complete genomeLSR2 protein2e-0961.2
NC_016906:1458158:146557314655731465917345Gordonia polyisoprenivorans VH2 chromosome, complete genomeLSR2-like protein8e-0855.8