Pre_GI Gene

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Host: NC_009479 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009479:34001 Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
34001374053405putative rhs related proteinQuickGO ontologyBLASTP
3911339457345conserved hypothetical protein similar to LSR2 proteinQuickGO ontologyBLASTP
3957740263687hypothetical proteinBLASTP
40341413421002hypothetical protein
4150042351852hypothetical protein
4268443211528hypothetical protein
4331743886570hypothetical membrane proteinQuickGO ontology
4463645133498hypothetical protein
4530145807507hypothetical protein
4627746672396hypothetical proteinBLASTP
4676146916156hypothetical protein
4696947142174hypothetical protein
4777048534765hypothetical proteinBLASTP
4888949074186hypothetical protein
4974950327579hypothetical protein
5062150809189hypothetical protein
5164351990348hypothetical protein
5208652940855hypothetical proteinBLASTP
5346554298834putative extracellular serine proteaseQuickGO ontologyBLASTP
5537156213843hypothetical proteinBLASTP