Pre_GI: BLASTP Hits

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Query: NC_008268:3233961:3249500 Rhodococcus sp. RHA1, complete genome

Start: 3249500, End: 3250543, Length: 1044

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015065:162317:1898301898301908491020Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceYVTN family beta-propeller repeat protein2e-21103
NC_016631:4530000:4547788454778845488791092Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein7e-2098.2
NC_007355:970670:9786529786529819363285Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceputative surface layer protein5e-1582
NC_020389:1730376:1739312173931217425843273Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-1274.3
NC_020389:415500:4302094302094316421434Methanosarcina mazei Tuc01, complete genomehypothetical protein4e-1272.4
NC_003901:500500:5162675162675177001434Methanosarcina mazei Go1, complete genomeputative surface layer protein4e-1272.4
NC_013665:918313:9259559259559270131059Methanocella paludicola SANAE, complete genomeputative cell surface protein6e-1272
NC_016631:4530000:4557222455722245586941473Granulicella mallensis MP5ACTX8 chromosome, complete genomepyrrolo-quinoline quinone beta-propeller repeat-containing protein7e-1271.6
NC_003552:3862275:3874976387497638764391464Methanosarcina acetivorans C2A, complete genomesurface antigen gene1e-1171.2
NC_003552:3862275:3878798387879838801351338Methanosarcina acetivorans C2A, complete genomesurface antigen gene1e-1067.8
NC_015422:2858228:2876953287695328779991047Alicycliphilus denitrificans K601 chromosome, complete genome40-residue YVTN family beta-propeller repeat-containing protein2e-1066.6
NC_016631:4530000:4539510453951045405411032Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein3e-1066.2
NC_008782:1510000:1529246152924615302921047Acidovorax sp. JS42, complete genome40-residue YVTN family beta-propeller repeat protein9e-1064.7
NC_003901:500500:5074305074305086891260Methanosarcina mazei Go1, complete genomeputative surface layer protein2e-0963.9
NC_020389:415500:4232174232174244761260Methanosarcina mazei Tuc01, complete genomeSurface layer protein2e-0963.9
NC_016768:3296478:3312205331220533136231419Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein4e-0962.8
NC_012943:3299744:3315516331551633168891374Mycobacterium tuberculosis KZN 1435 chromosome, complete genomePE-PGRS family protein4e-0962.8
NC_012207:1097228:1097228109722810986011374Mycobacterium bovis BCG str. Tokyo 172, complete genomePE-PGRS family protein4e-0962.8
NC_008769:1125567:1125567112556711269401374Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomePE-PGRS family protein4e-0962.8
NC_016804:1095846:1095846109584610972191374Mycobacterium bovis BCG str. Mexico chromosome, complete genomePE-PGRS family protein4e-0962.8
NC_000962:1095078:1095078109507810964511374Mycobacterium tuberculosis H37Rv, complete genomePE-PGRS FAMILY PROTEIN3e-0962.8
NC_009525:1096386:1096386109638610977591374Mycobacterium tuberculosis H37Ra, complete genomePE-PGRS family protein3e-0962.8
NC_017026:1095753:1095753109575310971291377Mycobacterium tuberculosis RGTB327 chromosome, complete genomePE-PGRS family protein5e-0962.4
NC_002945:1095337:1095529109552910969021374Mycobacterium bovis AF2122/97, complete genomePE-PGRS family protein5e-0962.4
NC_002755:1095105:1095105109510510965351431Mycobacterium tuberculosis CDC1551, complete genomePE_PGRS family protein5e-0962.4
NC_009565:1098847:1098847109884711002201374Mycobacterium tuberculosis F11, complete genomePE-PGRS family protein4e-0962.4
NC_010524:3445641:344471234447123445644933Leptothrix cholodnii SP-6, complete genome40-residue YVTN family beta-propeller repeat protein6e-0962
NC_013595:6978614:6985665698566569873351671Streptosporangium roseum DSM 43021, complete genomehypothetical protein8e-0961.6
NC_015572:2541968:254196825419682542918951Methylomonas methanica MC09 chromosome, complete genome40-residue YVTN family beta-propeller repeat protein3e-0859.7
NC_008344:49039:6488964889659381050Nitrosomonas eutropha C91, complete genome40-residue YVTN family beta-propeller repeat protein6e-0858.9
NC_019673:2671458:2690524269052426918521329Saccharothrix espanaensis DSM 44229 complete genomeYVTN family beta-propeller repeat protein2e-0757
NC_003552:3862275:3872784387278438738181035Methanosarcina acetivorans C2A, complete genomesurface antigen gene2e-0756.6
NC_007947:2447635:245758224575822458535954Methylobacillus flagellatus KT, complete genome40-residue YVTN beta-propeller repeat3e-0756.2
NC_013093:1909305:1919236191923619205911356Actinosynnema mirum DSM 43827, complete genome40-residue YVTN family beta-propeller repeat protein8e-0755.1
NC_016631:4530000:4536243453624345372981056Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein1e-0654.7
NC_003901:500500:5005395005395018161278Methanosarcina mazei Go1, complete genomeputative surface layer protein1e-0654.3
NC_020389:415500:4163934163934177361344Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-0654.3
NC_008278:5855401:5857482585748258609313450Frankia alni ACN14a, complete genomeGlycine-rich cell wall structural protein precursor (partial match)2e-0653.9
NC_008686:1592073:1606847160684716082021356Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein2e-0653.5
NC_003552:576500:5913595913595928071449Methanosarcina acetivorans C2A, complete genomesurface antigen gene3e-0653.1
NC_010511:6756000:6774277677427767752841008Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein4e-0652.8