Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:1748635:1752954 Rhodococcus sp. RHA1, complete genome

Start: 1752954, End: 1753316, Length: 363

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018524:1745949:175883917588391759642804Nocardiopsis alba ATCC BAA-2165 chromosome, complete genometransposase DDE domain protein3e-23106
NC_021177:1418213:143120114312011431698498Streptomyces fulvissimus DSM 40593, complete genomeIS4 family transposase1e-21102
NC_015953:2349503:236568223656822366083402Streptomyces sp. SirexAA-E chromosome, complete genometransposase IS4 family protein1e-21101
NC_013929:10950:184981849819010513Streptomyces scabiei 87.22 chromosome, complete genomeIS transposase1e-21101
NC_013929:4807910:482213548221354822632498Streptomyces scabiei 87.22 chromosome, complete genomeIS transposase1e-21101
NC_003296:673790:717424717424717810387Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeIS1421-transposase protein B3e-21100
NC_003296:87313:101434101434101820387Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completeTIS1421-transposase protein B3e-21100
NC_013757:729986:746466746466746714249Geodermatophilus obscurus DSM 43160, complete genome2e-21100
NC_006361:2225072:223726622372662237676411Nocardia farcinica IFM 10152, complete genomeputative transposase7e-2199.4
NC_015957:3282183:329440832944083294761354Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-2097.4
NC_013722:3081459:308782530878253088205381Xanthomonas albilineans, complete genomeputative transposase (fragment) protein3e-2096.7
NC_013722:1425588:144637514463751446755381Xanthomonas albilineans, complete genomeputative tis1421-transposase protein b3e-2096.7
NC_009142:5459819:547686854768685477242375Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS43e-1994
NC_009142:2725000:273128127312812731655375Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS43e-1994
NC_007777:461500:473885473885474535651Frankia sp. CcI3, complete genometransposase, IS43e-1994
NC_003155:5163382:517253351725335172976444Streptomyces avermitilis MA-4680, complete genomeIS1647-like transposase2e-1890.9
NC_012721:1686450:169030016903001690812513Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase, IS4 family protein3e-1890.1
NC_012720:114489:131206131206131718513Burkholderia glumae BGR1 plasmid bglu_3p, complete sequence3e-1890.1
NC_012723:71637:790607906079572513Burkholderia glumae BGR1 plasmid bglu_1p, complete sequenceTransposase, IS4 family protein3e-1890.1
NC_009142:2480608:250942125094212509795375Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS48e-1889
NC_015312:6717973:671965967196596720468810Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS4 family protein1e-1788.6
NC_010572:8493946:851818385181838518650468Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase1e-1788.2
NC_010572:1:272802728027747468Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase1e-1788.2
NC_008752:558828:565622565622566134513Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase, IS4 family protein2e-1788.2
NC_014310:811977:824996824996825367372Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransposase, is4-like5e-1786.3
NC_006513:286549:299420299420299893474Azoarcus sp. EbN1, complete genometransposase, is4 family, fragment5e-1786.3
NC_015381:3457784:349387934938793494430552Burkholderia gladioli BSR3 chromosome 1, complete sequenceTransposase7e-1785.9
NC_012723:71637:923769237692741366Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencehypothetical protein1e-1685.1
NC_012723:71637:846138461384978366Burkholderia glumae BGR1 plasmid bglu_1p, complete sequencehypothetical protein2e-1684.3
NC_018750:6070260:607913960791396079993855Streptomyces venezuelae ATCC 10712, complete genometransposase2e-1684.3
NC_008752:2056547:206526520652652065786522Acidovorax avenae subsp. citrulli AAC00-1, complete genometransposase, IS4 family protein2e-1684.3
NC_012720:114489:138752138752139540789Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceTransposase3e-1684
NC_012721:137046:143893143893144681789Burkholderia glumae BGR1 chromosome 2, complete genome3e-1684
NC_012721:1052883:106333310633331064121789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase3e-1684
NC_012720:114489:132821132821133609789Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceTransposase3e-1684
NC_014221:3068222:308245630824563083223768Truepera radiovictrix DSM 17093 chromosome, complete genome3e-1684
NC_012721:979656:979656979656980444789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase3e-1684
NC_015957:5225903:523182052318205232287468Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-1684
NC_012721:770651:799046799046799834789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase3e-1684
NC_012724:2547500:255709025570902557752663Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase, IS43e-1683.6
NC_009142:2565561:257343925734392573867429Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS4 family6e-1682.8
NC_017186:6395435:642739464273946427792399Amycolatopsis mediterranei S699 chromosome, complete genomeIS4 family transposase7e-1682.4
NC_014318:6395392:642735164273516427749399Amycolatopsis mediterranei U32 chromosome, complete genomeIS4 family transposase7e-1682.4
NC_015957:5182460:519511051951105195661552Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-1581.6
NC_009142:2822260:283713328371332837957825Saccharopolyspora erythraea NRRL 2338, complete genometransposase1e-1581.6
NC_009142:2480608:250761225076122508436825Saccharopolyspora erythraea NRRL 2338, complete genometransposase1e-1581.6
NC_016111:6222461:623352962335296234098570Streptomyces cattleya NRRL 8057, complete genometransposase2e-1581.3
NC_010002:1879220:192708419270841927506423Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein2e-1581.3
NC_012721:1986436:199255119925511993339789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase3e-1580.5
NC_019673:3559185:356572235657223566204483Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-1579.7
NC_009142:5647737:567176656717665672590825Saccharopolyspora erythraea NRRL 2338, complete genometransposase5e-1579.7
NC_007951:1042291:105402510540251054654630Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative transposase9e-1579
NC_009142:2725000:273820627382062738634429Saccharopolyspora erythraea NRRL 2338, complete genomeIS1647-like transposase9e-1579
NC_016626:400080:413171413171413686516Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative transposase IS41e-1478.6
NC_012721:1635999:164307216430721643443372Burkholderia glumae BGR1 chromosome 2, complete genome2e-1477.8
NC_016109:8635989:863888386388838639257375Kitasatospora setae KM-6054, complete genomeputative transposase2e-1477.4
NC_008752:3828438:384022538402253840563339Acidovorax avenae subsp. citrulli AAC00-1, complete genome4e-1476.6
NC_010087:376918:442853442853443263411Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS4 family protein4e-1476.6
NC_010801:481601:481601481601482005405Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu18 truncated transposase5e-1476.6
NC_013595:891897:901100901100901535436Streptosporangium roseum DSM 43021, complete genome5e-1476.3
NC_015957:3282183:329405332940533294382330Streptomyces violaceusniger Tu 4113 chromosome, complete genometransposase IS4 family protein5e-1476.3
NC_010617:263985:283499283499284167669Kocuria rhizophila DC2201, complete genomeputative transposase1e-1375.5
NC_012721:2556160:257468425746842575346663Burkholderia glumae BGR1 chromosome 2, complete genome2e-1374.3
NC_003888:56225:697996979970647849Streptomyces coelicolor A3(2), complete genometransposase2e-1374.3
NC_012987:32296:327573275733101345Methylobacterium extorquens DM4 plasmid p1METDI, complete sequence3e-1373.9
NC_012718:27089:337143371434502789Burkholderia glumae BGR1 plasmid bglu_2p, complete sequenceTransposase3e-1373.9
NC_012721:770651:777391777391778179789Burkholderia glumae BGR1 chromosome 2, complete genome3e-1373.9
NC_012721:2021885:203459420345942035382789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase3e-1373.9
NC_012721:770651:822609822609823397789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase3e-1373.9
NC_012724:3222415:323547732354773236265789Burkholderia glumae BGR1 chromosome 1, complete genome3e-1373.9
NC_012720:114489:120611120611121399789Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceTransposase3e-1373.9
NC_012724:1308000:132067013206701321458789Burkholderia glumae BGR1 chromosome 1, complete genomeTransposase, IS42e-1373.9
NC_017030:5558429:560512256051225605712591Corallococcus coralloides DSM 2259 chromosome, complete genometransposase, is4-like protein3e-1373.6
NC_010002:1879220:192198019219801922318339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein4e-1373.2
NC_010002:3399770:341327334132733413611339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein4e-1373.2
NC_010002:3980832:398613339861333986471339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein4e-1373.2
NC_010002:4890192:489831248983124898650339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein4e-1373.2
NC_010002:3980832:399090239909023991240339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein4e-1373.2
NC_010002:4073724:409164440916444091982339Delftia acidovorans SPH-1, complete genometransposase, IS4 family protein4e-1373.2
NC_018750:770500:780122780122780949828Streptomyces venezuelae ATCC 10712, complete genomeputative transposase6e-1372.8
NC_014310:1822751:187172918717291872277549Ralstonia solanacearum PSI07 megaplasmid, complete sequencetransposase, is4-like7e-1372.8
NC_013595:8162181:818477381847738184997225Streptosporangium roseum DSM 43021, complete genome9e-1372
NC_012721:1052883:106838510683851069173789Burkholderia glumae BGR1 chromosome 2, complete genomeTransposase2e-1271.2
NC_007337:10464:244892448925277789Ralstonia eutropha JMP134 plasmid 1, complete sequenceTransposase, IS42e-1270.9
NC_010627:233572:240153240153240626474Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence2e-1270.9
NC_017030:9465809:947448994744899474860372Corallococcus coralloides DSM 2259 chromosome, complete genomeputative transposase for insertion sequence element IS4025e-1269.7
NC_017030:572871:583490583490583861372Corallococcus coralloides DSM 2259 chromosome, complete genomeputative transposase for insertion sequence element IS4025e-1269.7
NC_012721:2406874:241881624188162419148333Burkholderia glumae BGR1 chromosome 2, complete genome5e-1269.7
NC_012988:1162838:117072011707201171064345Methylobacterium extorquens DM4, complete genomehypothetical protein2e-1168.2
NC_014623:4426416:443932444393244440133810Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein6e-1166.2
NC_015563:3511951:351926835192683519903636Delftia sp. Cs1-4 chromosome, complete genometransposase IS4 family protein6e-1166.2
NC_014623:7331860:734429673442967345105810Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein6e-1165.9
NC_014623:6651798:665859966585996659408810Stigmatella aurantiaca DW4/3-1 chromosome, complete genometransposase, is4-like protein7e-1165.9
NC_019673:3041936:304860430486043049026423Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1064.3
NC_006087:2292791:230524223052422306087846Leifsonia xyli subsp. xyli str. CTCB07, complete genome5e-1062.8
NC_016582:11878078:119023021190230211902730429Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase IS41e-0961.6
NC_019892:429975:442087442087442644558Singulisphaera acidiphila DSM 18658 chromosome, complete genome2e-0961.2
NC_009142:2480608:250568425056842505983300Saccharopolyspora erythraea NRRL 2338, complete genometransposase, IS4 family4e-0856.6
NC_015381:2405446:241533124153312415630300Burkholderia gladioli BSR3 chromosome 1, complete sequence4e-0856.6
NC_009921:3666898:372656637265663726922357Frankia sp. EAN1pec, complete genomehypothetical protein9e-0752.4
NC_016582:9551123:956723995672399568081843Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-0652
NC_016109:2065326:207929020792902079598309Kitasatospora setae KM-6054, complete genomeputative transposase3e-0650.8
NC_016109:2473126:248257624825762482884309Kitasatospora setae KM-6054, complete genomeputative transposase5e-0649.7