Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:10950 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
9853109531101hypothetical proteinBLASTP
10950134932544hypothetical proteinBLASTP
13490148091320hypothetical proteinBLASTP
1541415791378hypothetical protein
15838169831146DNA-binding proteinQuickGO ontologyBLASTP
1698017270291hypothetical proteinBLASTP
1730118194894integrase core domainQuickGO ontologyBLASTP
1819118496306transposaseQuickGO ontologyBLASTP
1849819010513IS transposaseQuickGO ontologyBLASTP
1894719306360hypothetical proteinBLASTP
1938019562183hypothetical protein
1976820592825hypothetical proteinBLASTP
2067020855186hypothetical protein
2128221518237hypothetical protein
2163622469834hypothetical proteinBLASTP
2245023355906hypothetical proteinBLASTP
23352245241173hypothetical proteinBLASTP
24862261901329hypothetical proteinBLASTP
2619726682486hypothetical protein
26836278731038hypothetical protein
2801228185174hypothetical proteinBLASTP
28496307242229telomere-binding proteinQuickGO ontologyBLASTP