Pre_GI: BLASTP Hits

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Query: NC_008260:125500:129582 Alcanivorax borkumensis SK2, complete genome

Start: 129582, End: 130286, Length: 705

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018691:3525430:357746635774663578158693Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, GntR family protein1e-29129
NC_008027:1847040:184704018470401847699660Pseudomonas entomophila L48, complete genometranscriptional regulator (GntR-family)3e-25115
NC_020829:3434736:345600434560043456663660Pseudomonas denitrificans ATCC 13867, complete genomeGntR family transcriptional regulator8e-25114
NC_010501:3987615:401279440127944013453660Pseudomonas putida W619, complete genometranscriptional regulator, GntR family2e-23109
NC_013939:1625491:163746116374611638132672Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator1e-1479.7
NC_015458:3390674:340150434015043402238735Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator6e-1477.8
NC_014931:3642779:365811536581153658783669Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, GntR family2e-1375.9
NC_014840:205723:266022266022266699678Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, GntR family4e-1271.6
NC_013173:2261396:227212122721212272783663Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, GntR family7e-1167.8
NC_007963:3553678:356654835665483567216669Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, GntR family7e-1167.4
NC_015458:1692401:169240116924011693138738Pusillimonas sp. T7-7 chromosome, complete genomeGntR family transcriptional regulator9e-1167
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR1e-1066.6
NC_012108:5273289:528731952873195287996678Desulfobacterium autotrophicum HRM2, complete genomeputative transcriptional regulator1e-1066.6
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator1e-1066.6
NC_009922:315870:338735338735339421687Alkaliphilus oremlandii OhILAs, complete genometranscriptional regulator, GntR family2e-1066.2
NC_020291:4033000:404904640490464049720675Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, GntR family2e-1066.2
NC_014098:1258559:126150612615061262153648Bacillus tusciae DSM 2912 chromosome, complete genometranscriptional regulator, GntR family2e-1065.9
NC_013739:2106662:212626421262642127019756Conexibacter woesei DSM 14684, complete genometranscriptional regulator, GntR family3e-1065.5
NC_013446:2655955:266091026609102661545636Comamonas testosteroni CNB-2, complete genometranscriptional regulator, GntR family6e-1064.7
NC_004578:6089958:610844861084486109113666Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, GntR family6e-1064.3
NC_014963:3175912:317591231759123176580669Terriglobus saanensis SP1PR4 chromosome, complete genomeGntR family transcriptional regulator7e-1064.3
NC_014910:3458475:348208934820893482757669Alicycliphilus denitrificans BC chromosome, complete genomegntr domain protein2e-0962.8
NC_015977:2565922:256592225659222566599678Roseburia hominis A2-183 chromosome, complete genomeGntR domain containing protein2e-0962.8
NC_008596:4104476:412930241293024129928627Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, GntR family protein2e-0962.8
NC_015723:1047418:105977810597781060590813Cupriavidus necator N-1 chromosome 2, complete sequenceGntR family transcriptional regulator2e-0962.8
NC_011894:6485500:649703764970376497684648Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, GntR family2e-0962.4
NC_013939:1625491:163812216381221638790669Deferribacter desulfuricans SSM1, complete genomeGntR family transcriptional regulator4e-0962
NC_010002:3357752:337233533723353373021687Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family4e-0962
NC_013520:1905554:191069019106901911397708Veillonella parvula DSM 2008, complete genometranscriptional regulator, GntR family3e-0962
NC_016894:3329562:333153633315363332213678Acetobacterium woodii DSM 1030 chromosome, complete genomeGntR family transcriptional regulator3e-0962
NC_008686:1383891:140152714015271402195669Paracoccus denitrificans PD1222 chromosome 1, complete sequencetranscriptional regulator, GntR family3e-0962
NC_021150:2315362:231536223153622316084723Azotobacter vinelandii CA6, complete genometranscriptional regulator, GntR8e-0960.8
NC_012560:2315350:231535023153502316072723Azotobacter vinelandii DJ, complete genometranscriptional regulator, GntR8e-0960.8
NC_004463:2262467:226446822644682265103636Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein8e-0960.5
NC_008254:611437:6283116283116295011191Mesorhizobium sp. BNC1, complete genometranscriptional regulator, GntR family1e-0860.1
NC_004193:2921103:293098429309842931643660Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0860.1
NC_009937:412302:415716415716416384669Azorhizobium caulinodans ORS 571, complete genomeGntR family transcriptional regulator1e-0860.1
NC_012522:3038890:304323930432393043943705Rhodococcus opacus B4, complete genomeputative GntR family transcriptional regulator2e-0859.7
NC_016641:4727000:472732347273234728054732Paenibacillus terrae HPL-003 chromosome, complete genomegluconate operon transcriptional repressor2e-0859.7
NC_009439:3770282:380040438004043801204801Pseudomonas mendocina ymp, complete genomeGntR family transcriptional regulator2e-0859.7
NC_008380:4078670:408035540803554081065711Rhizobium leguminosarum bv. viciae 3841, complete genomeputative GntR family transcriptional regulator2e-0859.3
NC_019940:2931500:295856629585662959279714Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator2e-0859.3
NC_006582:883922:909551909551910216666Bacillus clausii KSM-K16, complete genometranscriptional regulator, GntR family3e-0858.9
NC_003911:1791878:184090118409011841641741Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, GntR family3e-0858.9
NC_008595:312861:330795330795331451657Mycobacterium avium 104, complete genometranscriptional regulator, GntR family protein3e-0858.5
NC_006350:1938631:197258619725861973254669Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GntR-family transcriptional regulator4e-0858.5
NC_014206:2971304:298470229847022985352651Geobacillus sp. C56-T3 chromosome, complete genomeGntR family transcriptional regulator5e-0858.2
NC_013947:1696671:171062117106211711286666Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family5e-0858.2
NC_020209:3874844:390377339037733904372600Pseudomonas poae RE*1-1-14, complete genomeGntR family transcriptional regulator8e-0857.4
NC_010676:897801:899693899693900427735Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, GntR family9e-0857.4
NC_010002:3357752:335915233591523359841690Delftia acidovorans SPH-1, complete genometranscriptional regulator, GntR family1e-0757
NC_014011:527681:541220541220541882663Aminobacterium colombiense DSM 12261 chromosome, complete genometranscriptional regulator, GntR family1e-0757
NC_014394:93344:110272110272110943672Gallionella capsiferriformans ES-2 chromosome, complete genometranscriptional regulator, GntR family9e-0857
NC_017337:2588331:260247626024762603156681Staphylococcus aureus subsp. aureus ED133 chromosome, completegluconate operon transcriptional repressor1e-0756.6
NC_007622:2501562:251498425149842515664681Staphylococcus aureus RF122, complete genomegluconate operon transcription repressor1e-0756.6
NC_008699:1247423:124742312474231248148726Nocardioides sp. JS614, complete genomeGntR domain protein1e-0756.6
NC_008699:2260606:228173422817342282474741Nocardioides sp. JS614, complete genomeGntR domain protein2e-0756.2
NC_020829:809457:813097813097813771675Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator2e-0756.2
NC_010511:7553703:755681175568117557539729Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator2e-0756.2
NC_021171:2019755:202131920213192022035717Bacillus sp. 1NLA3E, complete genometranscriptional regulator2e-0755.8
NC_007348:752692:758795758795759571777Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein GntR, HTH:GntR, C-terminal2e-0755.8
NC_007952:1293024:129591312959131296710798Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, GntR family2e-0755.8
NC_012108:3824977:383239938323993833073675Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (GntR family protein)3e-0755.5
NC_014632:336000:336166336166336810645Ilyobacter polytropus DSM 2926 chromosome, complete genomeGntR family transcriptional regulator4e-0755.1
NC_009664:4423829:451763545176354518357723Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, GntR family4e-0755.1
NC_017351:2594171:261484426148442615521678Staphylococcus aureus subsp. aureus 11819-97 chromosome, completebacterial regulatory s, gntR family protein5e-0754.7
NC_012759:1409086:141034514103451411010666Escherichia coli BW2952 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0754.7
NC_000913:1517051:151828615182861518951666Escherichia coli K12, complete genomepredicted DNA-binding transcriptional regulator5e-0754.7
NC_010473:1607646:160888116088811609546666Escherichia coli str. K-12 substr. DH10B, complete genomepredicted DNA-binding transcriptional regulator5e-0754.7
AC_000091:1521976:152197615219761522641666Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator5e-0754.7
NC_008595:5168941:517071151707115171400690Mycobacterium avium 104, complete genometranscriptional regulator, GntR family protein5e-0754.7
NC_002952:2653482:266725526672552667935681Staphylococcus aureus subsp. aureus MRSA252, complete genomegluconate operon transcriptional repressor5e-0754.7
NC_007795:2561928:258795925879592588639681Staphylococcus aureus subsp. aureus NCTC 8325, complete genomegluconate operon transcriptional repressor, putative5e-0754.7
NC_002951:2554511:257601625760162576696681Staphylococcus aureus subsp. aureus COL, complete genomegluconate operon transcriptional repressor5e-0754.7
NC_009487:2656420:267730726773072677987681Staphylococcus aureus subsp. aureus JH9 chromosome, completeGntR family transcriptional regulator5e-0754.7
NC_013450:2572530:259339225933922594072681Staphylococcus aureus subsp. aureus ED98, complete genomegluconate operon transcriptional repressor5e-0754.7
NC_017341:2648631:266958426695842670264681Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,gluconate operon transcriptional repressor5e-0754.7
NC_017347:2616000:263432226343222635002681Staphylococcus aureus subsp. aureus T0131 chromosome, completeGluconate operon transcriptional repressor5e-0754.7
NC_017342:751496:755853755853756560708Staphylococcus aureus subsp. aureus TCH60 chromosome, completegluconate operon transcriptional repressor5e-0754.7
NC_003047:3360000:337337633733763374068693Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN7e-0754.3
NC_017275:927814:944351944351944989639Sulfolobus islandicus HVE10/4 chromosome, complete genomeGntR family transcriptional regulator7e-0754.3
NC_009668:46010:612776127761927651Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceGntR family transcriptional regulator7e-0754.3
NC_004337:1783645:180433618043361805058723Shigella flexneri 2a str. 301, complete genomehypothetical protein6e-0754.3
NC_017328:1835108:185687918568791857601723Shigella flexneri 2002017 chromosome, complete genomeputative HTH-type transcriptional regulator yncC6e-0754.3
NC_009440:1045882:105601610560161056675660Metallosphaera sedula DSM 5348 chromosome, complete genomeGntR family transcriptional regulator8e-0753.9
NC_014210:5683616:569274356927435693420678Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, GntR family1e-0653.5
NC_014541:643604:667525667525668166642Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, GntR family1e-0653.5
NC_018681:2447871:245134424513442451982639Nocardia brasiliensis ATCC 700358 chromosome, complete genomeGntR family transcriptional regulator2e-0652.8
NC_009921:5609770:561622556162255616935711Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family3e-0652.4
NC_006350:1909639:191544419154441916208765Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative GntR-family regulatory protein3e-0652
NC_002754:1061851:108024710802471080885639Sulfolobus solfataricus P2, complete genomeTranscriptional regulator3e-0652
NC_010505:2690939:270182227018222702604783Methylobacterium radiotolerans JCM 2831, complete genomeGntR domain protein4e-0652
NC_016906:3286384:328959032895903290342753Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative GntR family transcriptional regulator4e-0652
NC_013093:2633000:263436726343672635044678Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, GntR family5e-0651.6
NC_017271:4193000:422159942215994222318720Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator MdcY family4e-0651.6
NC_010337:2339056:234209423420942342804711Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, GntR family4e-0651.6
NC_013526:105195:119507119507120259753Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeGntR domain protein4e-0651.6
NC_015145:92397:917359173592400666Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeGntR family transcriptional regulator7e-0651.2
NC_007644:1352794:135436113543611355110750Moorella thermoacetica ATCC 39073, complete genomeregulatory protein GntR, HTH6e-0651.2
CP002207:3584000:359051735905173591182666Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator6e-0651.2
NC_014639:3584000:359051735905173591182666Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator6e-0651.2
NC_002678:5060670:510937251093725110070699Mesorhizobium loti MAFF303099, complete genometranscription regulator6e-0651.2
NC_016147:2964178:297771029777102978438729Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeGntR family transcriptional regulator6e-0651.2
NC_006510:2044347:206127920612792062007729Geobacillus kaustophilus HTA426, complete genometranscriptional regulator5e-0651.2
NC_014532:2989185:299424429942442994999756Halomonas elongata DSM 2581, complete genomeGntR domain protein5e-0651.2
NC_016803:3502749:351406835140683514757690Desulfovibrio desulfuricans ND132 chromosome, complete genomeGntR family transcriptional regulator5e-0651.2
NC_008258:1784637:180366018036601804325666Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-0651.2
NC_014831:2082304:210025021002502100963714Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, GntR family8e-0650.8
UCMB5137:3660165:368860236886023689270669Bacillus atrophaeus UCMB-5137putative transcriptional regulator7e-0650.8
NC_015061:2927707:293182529318252932523699Rahnella sp. Y9602 chromosome, complete genomeGntR family transcriptional regulator7e-0650.8
NC_017047:2957957:296207429620742962772699Rahnella aquatilis HX2 chromosome, complete genomeGntR family transcriptional regulator7e-0650.8
NC_012660:1804610:183445618344561835124669Pseudomonas fluorescens SBW25 chromosome, complete genomeputative GntR family regulatory protein7e-0650.8
NC_013524:392089:401901401901402647747Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genometranscriptional regulator, GntR family7e-0650.8
NC_015724:339500:343813343813344547735Cupriavidus necator N-1 plasmid BB2p, complete sequenceGntR family transcriptional regulator1e-0550.4