Pre_GI: BLASTP Hits

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Query: NC_008043:86470:91339 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 91339, End: 91971, Length: 633

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:2752500:275627227562722756904633Dinoroseobacter shibae DFL 12, complete genomehypothetical protein2e-75281
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein4e-67254
NC_008702:2520500:252684025268402527454615Azoarcus sp. BH72, complete genomeputative Tyrosine recombinase xerD3e-65248
NC_008740:3520500:355204135520413552655615Marinobacter aquaeolei VT8, complete genomephage integrase family protein1e-63242
NC_017506:4380196:440114444011444401758615Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein3e-63241
NC_016002:2946702:296022929602292960843615Pseudogulbenkiania sp. NH8B, complete genomephage integrase family protein4e-63240
NC_014539:743523:750816750816751442627Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase family protein4e-63240
NC_010170:4739925:475923847592384759852615Bordetella petrii, complete genomehypothetical protein7e-63239
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein8e-63239
NC_009434:3611738:368162936816293682249621Pseudomonas stutzeri A1501, complete genomephage integrase family site specific recombinase1e-61236
NC_007336:66000:825458254583171627Ralstonia eutropha JMP134 megaplasmid, complete sequencePhage integrase1e-61235
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC1e-61235
NC_010511:871905:881963881963882592630Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-60232
NC_014153:2077647:208438620843862085012627Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein4e-60231
NC_012792:962292:971437971437972060624Variovorax paradoxus S110 chromosome 2, complete genomeintegrase family protein4e-60230
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC7e-60229
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein8e-60229
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC3e-59228
NC_011757:5048714:507994450799445080573630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein1e-58226
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase5e-58224
NC_011757:3540992:354603435460343546663630Methylobacterium chloromethanicum CM4, complete genomeintegrase family protein8e-58223
NC_010510:339879:352204352204352836633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein9e-58223
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein2e-57222
NC_014394:1626699:163772816377281638342615Gallionella capsiferriformans ES-2 chromosome, complete genomeintegrase family protein1e-57222
NC_010510:339879:339879339879340511633Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein1e-57222
NC_012988:769981:823391823391824020630Methylobacterium extorquens DM4, complete genomeDNA integration/recombination/inversion protein, site-specific recombinase, phage integrase family2e-57221
NC_010172:798923:848604848604849233630Methylobacterium extorquens PA1, complete genomeintegrase family protein2e-57221
NC_013956:1762171:179168017916801792282603Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein3e-56218
NC_015563:4093650:410572541057254106348624Delftia sp. Cs1-4 chromosome, complete genomeintegrase family protein3e-56218
NC_016816:4129299:415125441512544151856603Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family3e-56218
NC_009778:1222273:123099312309931231595603Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-56216
NC_011751:3048490:307718430771843077864681Escherichia coli UMN026 chromosome, complete genomesite-specific recombinase, phage integrase family8e-55213
NC_011004:4073916:410016341001634100795633Rhodopseudomonas palustris TIE-1, complete genomeintegrase family protein1e-54213
NC_009438:236424:236424236424237026603Shewanella putrefaciens CN-32 chromosome, complete genomephage integrase family protein1e-54212
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein7e-54210
NC_007722:851129:863700863700864338639Erythrobacter litoralis HTCC2594, complete genomephage integrase family protein9e-53206
NC_009512:2238437:224339322433932244109717Pseudomonas putida F1, complete genomephage integrase family protein6e-50197
NC_014012:3812754:382801038280103828606597Shewanella violacea DSS12, complete genomesite-specific recombinase, phage integrase family8e-45179
NC_009092:261778:270161270161270757597Shewanella loihica PV-4, complete genomephage integrase family protein1e-43176
NC_017047:2957957:296663329666332967157525Rahnella aquatilis HX2 chromosome, complete genomeintegrase8e-42170
NC_008314:477722:499873499873500256384Ralstonia eutropha H16 chromosome 2, complete sequencefragmented site-specific recombinase XerC/XerD5e-33140
NC_016626:1699500:172012117201211720462342Burkholderia sp. YI23 plasmid byi_1p, complete sequenceintegrase family protein2e-30132
NC_017075:1869326:189689218968921897272381Rubrivivax gelatinosus IL144, complete genomephage integrase family protein2e-29129
NC_014258:42262:537175371754085369Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein4e-27120
NC_008314:477722:505403505403505858456Ralstonia eutropha H16 chromosome 2, complete sequencetruncated site-specific recombinase6e-25114
NC_020260:2725201:273642827364282736793366Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-23108
NC_007404:387827:395122395122395433312Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein4e-21101
NC_014500:894136:904367904367904684318Dickeya dadantii 3937 chromosome, complete genomeputative recombinase1e-1893.2
NC_004460:708416:725319725319725558240Vibrio vulnificus CMCP6 chromosome II, complete sequenceIntegrase3e-1788.6
NC_010511:871905:876911876911877126216Methylobacterium sp. 4-46 chromosome, complete genome2e-1685.9
NC_010625:1602191:162214016221401622406267Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein2e-1375.5
NC_020207:1614000:162429216242921624864573Enterococcus faecium NRRL B-2354, complete genomesite-specific recombinase4e-1271.2
UCMB5137:1522159:153732315373231537868546Bacillus atrophaeus UCMB-5137putative bacteriophage integrase6e-1167.4
NC_012796:3600630:361445136144513615008558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase8e-1167
NC_003911:633393:647663647663648393731Silicibacter pomeroyi DSS-3, complete genome1e-1066.2
NC_012796:3600630:362703436270343627591558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-1066.2
NC_004606:1107500:113322111332211133796576Streptococcus pyogenes SSI-1, complete genomeputative integrase/recombinase, XerC/XerD family3e-1065.5
NC_004070:747146:762960762960763535576Streptococcus pyogenes MGAS315, complete genomeputative recombinase - phage associated3e-1065.5
NC_003485:296140:308140308140308715576Streptococcus pyogenes MGAS8232, complete genomehypothetical protein3e-1065.5
NC_010674:950276:951654951654952292639Clostridium botulinum B str. Eklund 17B, complete genomesite-specific recombinase2e-0962.8
NC_012796:4075583:416552141655214166078558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-0961.2
NC_020409:1173796:118265711826571183256600Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase family protein5e-0961.2
NC_014844:511552:517143517143517697555Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase family protein7e-0960.8
NC_016803:3502749:352127235212723521871600Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegrase family protein6e-0960.8
NC_012796:985000:998898998898999455558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase7e-0960.5
NC_012796:1645856:166448516644851665042558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase1e-0860.1
NC_014650:603500:628630628630629172543Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegrase1e-0860.1
NC_014916:22644:437804378044349570Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequenceintegrase family protein1e-0859.7
NC_012563:1681639:170013117001311700736606Clostridium botulinum A2 str. Kyoto, complete genomephage integrase family protein2e-0859.3
NC_012796:3374911:342491734249173425474558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase2e-0858.9
NC_009617:1085000:108757010875701088175606Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephage integrase family protein4e-0858.2
NC_012796:77071:953999539995956558Desulfovibrio magneticus RS-1, complete genomesite-specific recombinase5e-0857.8
NC_020291:1122282:112310111231011123706606Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage integrase family protein8e-0857
NC_014011:1139818:115296411529641153572609Aminobacterium colombiense DSM 12261 chromosome, complete genomeintegrase family protein1e-0756.2
UCMB5137:1522159:153330715333071533849543Bacillus atrophaeus UCMB-5137site-specific recombinase, phage integrase family protein2e-0755.8
NC_007907:960104:101699610169961017559564Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0755.5
NC_012108:2159230:216676321667632167356594Desulfobacterium autotrophicum HRM2, complete genomesite-specific recombinase/integrase XerD2e-0755.5
NC_016894:3988180:399539039953903996004615Acetobacterium woodii DSM 1030 chromosome, complete genomeprophage LambdaBa04 site-specific recombinase phage integrase family4e-0755.1
NC_016894:3580274:358909935890993589713615Acetobacterium woodii DSM 1030 chromosome, complete genomehypothetical protein6e-0754.3
NC_010511:4696868:474309747430974743288192Methylobacterium sp. 4-46 chromosome, complete genome6e-0754.3
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD8e-0753.9
NC_020272:1311932:133478513347851335327543Bacillus amyloliquefaciens IT-45, complete genomesite-specific tyrosine recombinase8e-0753.9
NC_015520:2612767:261303226130322613904873Mahella australiensis 50-1 BON chromosome, complete genomeintegrase family protein9e-0753.5
NC_015634:2595500:262310826231082623683576Bacillus coagulans 2-6 chromosome, complete genomeDNA integration/recombination/inversion protein1e-0653.5
NC_014220:1858747:186560718656071866449843Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeintegrase family protein1e-0653.5
NC_015186:2197236:225468822546882255593906Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element1e-0653.1
NC_013766:679906:692805692805693347543Listeria monocytogenes 08-5578 chromosome, complete genomeprophage LambdaSa2, site-specific recombinase, phage integrase family2e-0652.8
NC_011883:2680380:270035627003562700949594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein2e-0652.4
NC_011883:2680380:269246126924612693054594Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,integrase family protein2e-0652.4
NC_020908:4263552:426684742668474267752906Octadecabacter arcticus 238, complete genomeintegrase/recombinase4e-0651.6
NC_020908:2466446:247991324799132480827915Octadecabacter arcticus 238, complete genomeintegrase/recombinase4e-0651.6
NC_008261:1787345:180851718085171809065549Clostridium perfringens ATCC 13124, complete genomesite-specific recombinase, phage integrase family8e-0650.4