Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3211399 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3211399, End: 3212238, Length: 840

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1885613:191158619115861912419834Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1893.2
NC_015590:145353:153201153201154082882Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein3e-1892.8
NC_008686:1472899:148270214827021483478777Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative restriction endonuclease6e-1891.7
NC_009656:6224221:624468362446836245624942Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein9e-1890.9
NC_015381:1588742:159024015902401591226987Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-1790.9
NC_015711:3122000:312514631251463125949804Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-1790.1
NC_015572:3091707:309988330998833100662780Methylomonas methanica MC09 chromosome, complete genomehypothetical protein2e-1790.1
NC_010172:280092:294982294982295788807Methylobacterium extorquens PA1, complete genomeputative restriction endonuclease2e-1789.7
NC_020418:116500:121820121820122602783Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-1789.7
NC_012811:1105395:111214011121401112946807Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative restriction endonuclease2e-1789.4
NC_007645:5747721:575324057532405753959720Hahella chejuensis KCTC 2396, complete genomepredicted restriction endonuclease1e-1686.7
NC_011138:3881446:388994938899493890719771Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein2e-1686.7
NC_010002:5143869:515651451565145157449936Delftia acidovorans SPH-1, complete genomehypothetical protein8e-1684.3
NC_007712:2978000:298900229890022989754753Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-1582.8
NC_013209:2476039:248321524832152484177963Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein4e-1582.4
NC_017100:2476822:248442224844222485384963Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein4e-1582.4
NC_017108:2474583:248175924817592482721963Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein4e-1582.4
NC_017111:2474601:248177724817772482739963Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein4e-1582.4
NC_017121:2474588:248176424817642482726963Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein4e-1582.4
NC_017125:2476802:248440224844022485364963Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein4e-1582.4
NC_017146:2476844:248444424844442485406963Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein4e-1582.4
NC_017150:2383361:239096123909612391923963Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein4e-1582.4
NC_020063:4127161:413034841303484131286939Enterobacteriaceae bacterium strain FGI 57, complete genomeputative restriction endonuclease7e-1581.3
NC_015761:4355335:435922743592274360006780Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-1479.7
NC_015436:1287873:130861913086191309524906Spirochaeta coccoides DSM 17374 chromosome, complete genomehypothetical protein3e-1479
NC_014752:1530000:1542116154211615432461131Neisseria lactamica ST-640, complete genometype II restriction endonuclease1e-1377.4
NC_017512:760000:7668387668387679561119Neisseria meningitidis WUE 2594, complete genomeputative type II restriction-modification system enzyme Res1e-1377.4
NC_012856:207194:221844221844222791948Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein1e-1377
NC_017514:1396000:1406950140695014080681119Neisseria meningitidis M01-240149 chromosome, complete genometype II restriction enzyme1e-1377
NC_009792:3225965:324036632403663241145780Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-1376.6
NC_012731:600518:628576628576629355780Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative restriction endonuclease2e-1376.3
NC_009648:5119271:514226151422615143040780Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-1376.3
NC_020064:1962172:197100519710051971904900Serratia marcescens FGI94, complete genomehypothetical protein3e-1375.9
NC_010120:788000:7953027953027964201119Neisseria meningitidis 053442, complete genometype II restriction endonuclease4e-1375.5
NC_012778:1819559:1856313185631318574731161Eubacterium eligens ATCC 27750, complete genomeputative restriction endonuclease1e-1273.6
NC_003116:988000:9960239960239971411119Neisseria meningitidis Z2491, complete genometype II restriction endonuclease1e-1273.6
NC_006677:1596560:166093616609361661688753Gluconobacter oxydans 621H, complete genomePutative restriction endonuclease2e-1273.6
NC_014923:2888723:289292728929272893922996Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehypothetical protein5e-1272
NC_017516:1439775:1452890145289014539211032Neisseria meningitidis H44/76 chromosome, complete genomehypothetical protein5e-1271.6
NC_017515:1429317:1441918144191814429491032Neisseria meningitidis M04-240196 chromosome, complete genome5e-1271.6
NC_017517:867595:8756538756538766841032Neisseria meningitidis M01-240355 chromosome, complete genomehypothetical protein6e-1271.6
NC_016510:1749967:175462017546201755393774Flavobacterium columnare ATCC 49512 chromosome, complete genomerestriction endonuclease1e-1170.9
NC_008618:1526392:153285015328501533620771Bifidobacterium adolescentis ATCC 15703, complete genomepossible restriction endonuclease2e-1170.1
NC_014638:183115:197199197199197990792Bifidobacterium bifidum PRL2010 chromosome, complete genometype II restriction-modification system restriction subunit3e-1169.3
NC_014169:231210:238629238629239417789Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease5e-1168.6
NC_017218:273503:280906280906281694789Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein5e-1168.6
NC_008800:575141:589409589409590173765Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein9e-1167.8
NC_013410:2586500:2593159259315925942141056Fibrobacter succinogenes subsp. succinogenes S85 chromosome,hypothetical protein1e-1067.4
NC_015224:610807:622685622685623449765Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-1064.7
NC_009665:3869904:388223138822313883046816Shewanella baltica OS185 chromosome, complete genomehypothetical protein3e-0962.4
NC_014366:2703226:272242027224202722923504Gamma proteobacterium HdN1, complete genomehypothetical protein2e-0860.1
NC_008529:1042220:105313110531311053916786Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted restriction endonuclease5e-0858.5
NC_014033:772754:784512784512785339828Prevotella ruminicola 23 chromosome, complete genomehypothetical protein6e-0858.2
NC_008322:722612:729171729171730019849Shewanella sp. MR-7, complete genomehypothetical protein1e-0757
NC_015136:2021799:202910520291052029803699Burkholderia sp. CCGE1001 chromosome 1, complete sequenceHNH nuclease2e-0756.6
NC_010995:4460413:447291044729104473668759Cellvibrio japonicus Ueda107, complete genomehypothetical protein4e-0755.5
NC_021177:2034722:2041848204184820429151068Streptomyces fulvissimus DSM 40593, complete genomeputative restriction endonuclease5e-0755.5
NC_011059:65414:693516935170124774Prosthecochloris aestuarii DSM 271, complete genomeputative restriction endonuclease1e-0653.9