Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:570500:576000 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 576000, End: 577151, Length: 1152

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008344:2374761:2402552240255224036431092Nitrosomonas eutropha C91, complete genomeprotein of unknown function UPF01185e-36152
NC_014752:1063506:1080381108038110814511071Neisseria lactamica ST-640, complete genomeintegral membrane protein1e-26120
NC_011035:829945:8319978319978330761080Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeTransporter, putative3e-26119
NC_010120:1065833:1084593108459310856631071Neisseria meningitidis 053442, complete genometransporter, putative1e-25117
NC_016931:513662:5379585379585390131056Rickettsia massiliae str. AZT80 chromosome, complete genomepermease PerM-like protein2e-1997.1
NC_009719:3532587:3565121356512135662181098Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein8e-1995.1
NC_009952:749426:7494267494267505111086Dinoroseobacter shibae DFL 12, complete genomeprotein of unknown function UPF01189e-1994.7
NC_009881:896007:8960078960078970621056Rickettsia akari str. Hartford, complete genomehypothetical protein1e-1894.4
NC_009883:641491:6414916414916425461056Rickettsia bellii OSU 85-389, complete genomePermease PerM-like protein3e-1893.2
NC_000963:803435:8034358034358044901056Rickettsia prowazekii str. Madrid E, complete genomePUTATIVE PERMEASE PERM HOMOLOG (perM)3e-1893.2
NC_017049:801469:8014698014698025241056Rickettsia prowazekii str. Chernikova chromosome, complete genomepermease PerM3e-1893.2
NC_017051:801488:8014888014888025431056Rickettsia prowazekii str. Dachau chromosome, complete genomepermease PerM3e-1893.2
NC_007940:669143:6691436691436701981056Rickettsia bellii RML369-C, complete genomePermease PerM-like protein3e-1893.2
NC_017048:33578:3357833578346331056Rickettsia prowazekii str. GvV257 chromosome, complete genomepermease PerM3e-1893.2
NC_017066:811565:8115658115658126201056Rickettsia typhi str. TH1527 chromosome, complete genomepermease2e-1687.4
NC_017062:812133:8121338121338131881056Rickettsia typhi str. B9991CWPP chromosome, complete genomepermease2e-1687.4
NC_006142:811469:8114698114698125241056Rickettsia typhi str. Wilmington, complete genomepossible permease2e-1687.4
NC_007517:2241104:2302120230212023032261107Geobacter metallireducens GS-15, complete genomehypothetical protein2e-1583.6
NC_010793:1075388:1101241110124111022931053Orientia tsutsugamushi str. Ikeda, complete genomepermease protein PerM1e-1480.9
NC_009488:327285:3418343418343428801047Orientia tsutsugamushi str. Boryong, complete genomepermease2e-1480.1
NC_014657:1193985:1202003120200312030671065Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein2e-1274.3
NC_011059:921690:9402349402349414421209Prosthecochloris aestuarii DSM 271, complete genomeprotein of unknown function UPF01185e-1065.9
NC_010519:1684901:1686281168628116873331053Haemophilus somnus 2336 chromosome, complete genomehypothetical protein7e-1065.5
NC_017243:1813158:1815850181585018170311182Brachyspira intermedia PWS/A chromosome, complete genomepermease PerM7e-1065.5
NC_014541:1414627:1414627141462714156941068Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function UPF01189e-1065.1
NC_016613:2628843:2640870264087026419431074Vibrio sp. EJY3 chromosome 1, complete sequencepermease PerM1e-0964.7
NC_010184:4219257:4232601423260142336681068Bacillus weihenstephanensis KBAB4, complete genomeprotein of unknown function UPF01184e-0962.8
NC_011772:4321117:4334169433416943352361068Bacillus cereus G9842, complete genomehypothetical protein4e-0859.7
NC_007530:4176462:4196151419615141972181068Bacillus anthracis str. 'Ames Ancestor', complete genomehypothetical protein4e-0859.7
NC_005957:4169610:4185310418531041863771068Bacillus thuringiensis serovar konkukian str. 97-27, completeprobable membrane protein4e-0859.7
NC_014335:4113154:4127842412784241289091068Bacillus cereus biovar anthracis str. CI chromosome, completemembrane protein4e-0859.7
NC_007576:471500:4896144896144908471234Lactobacillus sakei subsp. sakei 23K, complete genomePutative transport protein7e-0858.9
NC_011830:3786173:3799949379994938009831035Desulfitobacterium hafniense DCB-2, complete genomeprotein of unknown function UPF01189e-0858.2
NC_018515:989616:99944399944310004741032Desulfosporosinus meridiei DSM 13257 chromosome, complete genomepermease1e-0757.8
NC_015311:2626850:2629506262950626305851080Prevotella denticola F0289 chromosome, complete genomehypothetical protein1e-0654.7
NC_018868:1271742:1292801129280112938711071Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomemembrane protein, PerM family2e-0653.5
NC_013132:7954000:7992211799221179933021092Chitinophaga pinensis DSM 2588, complete genomeprotein of unknown function UPF01186e-0652.4