Pre_GI: BLASTP Hits

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Query: NC_007951:1042291:1067508 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1067508, End: 1068443, Length: 936

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012997:3651993:367338736733873674331945Teredinibacter turnerae T7901, complete genomecobalamin biosynthesis protein CobD5e-62238
NC_019673:967559:970326970326971288963Saccharothrix espanaensis DSM 44229 complete genomeCobalamin biosynthesis protein CobD1e-42173
NC_013595:8162181:8167677816767781687861110Streptosporangium roseum DSM 43021, complete genomeadenosylcobinamide-phosphate synthase2e-38159
NC_014210:4122514:412316941231694124056888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cobalamin biosynthesis protein CobD5e-37155
NC_016641:3173250:317791331779133178884972Paenibacillus terrae HPL-003 chromosome, complete genomecobalamin biosynthesis protein cobd1e-36154
NC_016627:4203775:420979642097964210749954Clostridium clariflavum DSM 19732 chromosome, complete genomecobalamin biosynthesis protein CobD3e-36152
NC_018524:557666:562851562851563756906Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomecobD/Cbib family protein1e-35150
NC_014622:1514416:151867815186781519649972Paenibacillus polymyxa SC2 chromosome, complete genomecobalamin biosynthesis protein cobd8e-36150
NC_012491:1263469:126987812698781270828951Brevibacillus brevis NBRC 100599, complete genomecobalamin biosynthesis protein3e-35149
NC_003228:2929006:293547129354712936403933Bacteroides fragilis NCTC 9343, complete genomeputative cobalamin biosynthesis protein7e-35147
NC_006347:2861498:286149828614982862463966Bacteroides fragilis YCH46, complete genomecobalamin biosynthesis protein CobD9e-35147
NC_009617:1487110:150014515001451501092948Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecobalamin biosynthesis protein3e-34145
NC_016776:2913966:292043129204312921363933Bacteroides fragilis 638R, complete genomeputative cobalamin biosynthesis protein3e-34145
NC_009253:2927802:293205129320512932998948Desulfotomaculum reducens MI-1 chromosome, complete genomecobalamin biosynthesis protein CobD2e-33142
NC_019903:1058657:107193710719371072902966Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,adenosylcobinamide-phosphate synthase1e-32140
NC_015437:1038476:104071810407181041683966Selenomonas sputigena ATCC 35185 chromosome, complete genomecobalamin biosynthesis protein CobD2e-32140
NC_020291:1593143:160630016063001607253954Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecobalamin biosynthesis protein CobD7e-32137
NC_014483:1376500:138088013808801381851972Paenibacillus polymyxa E681 chromosome, complete genomeCobalamin biosynthesis protein cobD8e-32137
NC_010729:1385217:1404353140435314053751023Porphyromonas gingivalis ATCC 33277, complete genomecobalamin biosynthesis protein9e-32137
NC_015565:624298:641487641487642434948Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecobalamin biosynthesis protein cbiB1e-31137
NC_013407:1177731:118437411843741185318945Methanocaldococcus vulcanius M7, complete genomecobalamin biosynthesis protein CobD7e-31134
NC_021182:1245692:124916912491691250125957Clostridium pasteurianum BC1, complete genomecobalamin biosynthesis protein CobD5e-29128
NC_011296:1151346:115037211503721151349978Thermodesulfovibrio yellowstonii DSM 11347, complete genomecobalamin biosynthesis protein CobD6e-29128
NC_011898:1558208:159067815906781591640963Clostridium cellulolyticum H10, complete genomecobalamin biosynthesis protein CobD1e-28127
NC_015680:691457:707734707734708600867Pyrococcus yayanosii CH1 chromosome, complete genomecobalamin biosynthesis protein2e-28126
NC_008702:2378890:238180823818082382734927Azoarcus sp. BH72, complete genomecobalamin biosynthesis transmembrane protein2e-28126
NC_014122:842560:845687845687846625939Methanocaldococcus infernus ME chromosome, complete genomecobalamin biosynthesis protein CobD4e-28125
NC_005126:3485330:349817934981793499138960Photorhabdus luminescens subsp. laumondii TTO1, complete genomecobalamin biosynthesis protein6e-28124
NC_007181:333891:351460351460352395936Sulfolobus acidocaldarius DSM 639, complete genomecobalamin biosynthesis protein2e-27123
NC_013892:853366:866699866699867673975Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalamin biosynthesis protein cbiB4e-27122
NC_012962:1827000:183203818320381832997960Photorhabdus asymbiotica, complete genomecobalamin biosynthesis protein cobd1e-26120
NC_014633:442755:475895475895476860966Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceadenosylcobinamide-phosphate synthase2e-26120
NC_009718:1470972:147966014796601480544885Fervidobacterium nodosum Rt17-B1, complete genomecobalamin biosynthesis protein CobD1e-24114
NC_013517:1055854:110338011033801104306927Sebaldella termitidis ATCC 33386, complete genomecobalamin biosynthesis protein CobD9e-25114
NC_009925:3344894:3358626335862633596451020Acaryochloris marina MBIC11017, complete genomecobalamin biosynthesis protein CbiB3e-24112
NC_014328:3482980:350108435010843502058975Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalamin biosynthesis protein CobD4e-24112
NC_008782:3361850:336432533643253365302978Acidovorax sp. JS42, complete genomecobalamin biosynthesis protein CobD9e-24110
NC_002505:2537655:254496625449662545919954Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeadenosylcobinamide-phosphate synthase3e-21102
NC_009457:2095366:209819820981982099151954Vibrio cholerae O395 chromosome 2, complete sequenceadenosylcobinamide-phosphate synthase3e-21102
NC_012578:2479150:248198224819822482935954Vibrio cholerae M66-2 chromosome I, complete sequenceadenosylcobinamide-phosphate synthase3e-21102
NC_012582:2626786:262961826296182630571954Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative cobalamin biosynthesis protein CbiB3e-21102
NC_012668:1036000:104874710487471049700954Vibrio cholerae MJ-1236 chromosome 1, complete sequenceadenosylcobinamide-phosphate synthase3e-21102
NC_016445:2012294:201512320151232016076954Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeadenosylcobinamide-phosphate synthase CobD3e-21102
NC_016944:2588435:259126425912642592217954Vibrio cholerae IEC224 chromosome I, complete sequenceadenosylcobinamide-phosphate synthase3e-21102
NC_018012:1789028:181314018131401814102963Thiocystis violascens DSM 198 chromosome, complete genomecobalamin biosynthesis protein CobD5e-2098.6
NC_005070:1588419:158841915884191589411993Synechococcus sp. WH 8102, complete genomeputative cobalamin biosynthetic protein1e-1997.1
NC_007516:774489:8073538073538083991047Synechococcus sp. CC9605, complete genomecobalamin biosynthesis protein CobD1e-1894
NC_014974:1076565:110312311031231103968846Thermus scotoductus SA-01 chromosome, complete genomecobalamin biosynthesis protein CobD5e-1788.6
NC_011184:2369662:238498323849832385936954Vibrio fischeri MJ11 chromosome I, complete sequenceadenosylcobinamide-phosphate synthase3e-1686.3
NC_014394:2228470:224891022489102249848939Gallionella capsiferriformans ES-2 chromosome, complete genomecobalamin biosynthesis protein CbiB9e-1684.7
NC_008148:672608:682997682997683902906Rubrobacter xylanophilus DSM 9941, complete genomecobalamin biosynthesis protein CobD4e-1375.5
NC_015424:1603000:162426816242681625230963Aeromonas veronii B565 chromosome, complete genomeCobalamin biosynthesis protein CbiB4e-0859.3
NC_008701:1226797:124557812455781246453876Pyrobaculum islandicum DSM 4184, complete genomecobalamin biosynthesis protein CbiB4e-0859.3