Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4661759 Polaromonas sp. JS666, complete genome

Start: 4661759, End: 4662895, Length: 1137

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015724:339500:3540603540603551751116Cupriavidus necator N-1 plasmid BB2p, complete sequenceopine oxidase subunit B3e-92338
NC_007948:4646344:4669711466971146708291119Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase1e-91337
NC_015136:2282488:2325858232585823270031146Burkholderia sp. CCGE1001 chromosome 1, complete sequenceFAD dependent oxidoreductase5e-87321
NC_011982:206784:2278512278512289211071Agrobacterium vitis S4 plasmid pTiS4, complete sequenceD-nopaline dehydrogenase3e-84311
NC_008752:620802:6221756221756233471173Acidovorax avenae subsp. citrulli AAC00-1, complete genomeFAD dependent oxidoreductase1e-80300
NC_003308:1:2997829978310961119Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequenceD-nopaline dehydrogenase3e-62239
NC_003065:27163:6338163381644991119Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencenopaline oxidase subunit B3e-62239
NC_007948:4558000:4579787457978745809141128Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase8e-62237
NC_014910:1912552:1933026193302619341861161Alicycliphilus denitrificans BC chromosome, complete genomefad dependent oxidoreductase4e-58225
NC_020210:3341976:3350044335004433511171074Geobacillus sp. GHH01, complete genomesarcosine oxidase subunit beta4e-31135
NC_009328:3322802:3330853333085333319261074Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesarcosine oxidase subunit beta6e-31135
NC_016641:2773757:2781634278163427828421209Paenibacillus terrae HPL-003 chromosome, complete genomesarcosine oxidase subunit beta2e-27123
NC_010676:2793237:2819758281975828208821125Burkholderia phytofirmans PsJN chromosome 2, complete sequenceFAD dependent oxidoreductase7e-22105
NC_013947:4363250:4377230437723043784111182Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeFAD dependent oxidoreductase3e-20100
NC_021184:2936244:2944356294435629454771122Desulfotomaculum gibsoniae DSM 7213, complete genomeglycine/D-amino acid oxidase, deaminating4e-2099.4
NC_015740:926920:9394409394409405371098Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeFAD-binding oxidoreductase5e-2099
NC_009439:1075170:1088508108850810895931086Pseudomonas mendocina ymp, complete genomeglycine oxidase ThiO8e-2098.2
NC_009718:643200:6625756625756637471173Fervidobacterium nodosum Rt17-B1, complete genomeFAD dependent oxidoreductase1e-1997.8
NC_015410:1144272:1156632115663211576961065Pseudomonas mendocina NK-01 chromosome, complete genomeglycine oxidase ThiO2e-1997.4
NC_015172:1075592:1104747110474711058681122Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeGlycine oxidase3e-1996.7
NC_020291:5409587:5419225541922554203521128Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeglycine/D-amino acid oxidase4e-1892.4
NC_015556:4118304:4123843412384341249161074Pseudomonas fulva 12-X chromosome, complete genomeglycine oxidase ThiO5e-1892
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase1e-1791.3
NC_005773:5684000:5706494570649457076481155Pseudomonas syringae pv. phaseolicola 1448A, complete genomeoxidoreductase, FAD-binding1e-1791.3
NC_007492:3954345:3993694399369439949531260Pseudomonas fluorescens PfO-1, complete genomeFAD dependent oxidoreductase1e-1790.9
NC_008027:5842740:5844182584418258454321251Pseudomonas entomophila L48, complete genomehydrogen cyanide synthase HcnC5e-1789
NC_014815:4621552:4650013465001346511611149Micromonospora sp. L5 chromosome, complete genomefad dependent oxidoreductase4e-1685.9
NC_017030:4588167:4606880460688046079951116Corallococcus coralloides DSM 2259 chromosome, complete genomeglycine oxidase ThiO9e-1684.7
NC_007005:2686551:2707924270792427091081185Pseudomonas syringae pv. syringae B728a, complete genomeFAD dependent oxidoreductase7e-1582
NC_011144:2674242:2691607269160726927881182Phenylobacterium zucineum HLK1, complete genomeFAD dependent oxidoreductase1e-1480.9
NC_019896:2805098:2830603283060328317121110Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeGlycine oxidase2e-1480.1
NC_008463:5364428:5368835536883553699291095Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative Glycine/D-amino acid oxidases3e-1479.7
NC_008148:2231045:2267216226721622685021287Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase3e-1479.7
NC_018080:5192264:5197779519777951988551077Pseudomonas aeruginosa DK2 chromosome, complete genomeD-amino acid oxidase5e-1479
NC_021171:1689518:1704959170495917060681110Bacillus sp. 1NLA3E, complete genomeFAD-dependent glycine oxidase ThiO9e-1478.2
NC_008391:2404443:2416021241602124171691149Burkholderia cepacia AMMD chromosome 2, complete sequenceFAD dependent oxidoreductase5e-1375.9
NC_005945:754517:7561427561427572511110Bacillus anthracis str. Sterne, complete genomeglycine oxidase8e-1375.1
NC_000918:465627:4835834835834846441062Aquifex aeolicus VF5, complete genomehypothetical protein5e-1272.4
NC_009434:1068281:108088810808881081748861Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding6e-1272
NC_007948:4558000:4583587458358745847171131Polaromonas sp. JS666, complete genomeFAD dependent oxidoreductase1e-1171.2
NC_010623:1871492:1896546189654618977031158Burkholderia phymatum STM815 chromosome 2, complete sequenceFAD dependent oxidoreductase3e-1170.1
NC_011901:3363500:3380830338083033819481119Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeglycine oxidase ThiO5e-1168.9
NC_009328:2378345:2400547240054724017731227Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeSoxB-like sarcosine oxidase subunit beta related3e-1066.6
NC_020829:809457:8109308109308120421113Pseudomonas denitrificans ATCC 13867, complete genomeFAD-dependent oxidoreductase3e-1066.6
NC_013522:991649:1012936101293610140871152Thermanaerovibrio acidaminovorans DSM 6589, complete genomeFAD dependent oxidoreductase8e-1065.1
NC_015942:1711026:1727085172708517281761092Acidithiobacillus ferrivorans SS3 chromosome, complete genomeFAD dependent oxidoreductase2e-0964.3
NC_012483:3731542:3798659379865937997921134Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, FAD-dependent3e-0963.2
NC_014931:3886405:3887567388756738888261260Variovorax paradoxus EPS chromosome, complete genomeFAD dependent oxidoreductase4e-0962.8
NC_014394:2228470:2232697223269722337611065Gallionella capsiferriformans ES-2 chromosome, complete genomeglycine oxidase ThiO8e-0961.6
NC_010730:741842:7791637791637802601098Sulfurihydrogenibium sp. YO3AOP1, complete genomeglycine oxidase ThiO9e-0961.6
NC_003413:1666520:1669331166933116704671137Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase, subunit beta1e-0860.8
NC_015474:301428:3036243036243047571134Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase2e-0860.5
NC_003910:2588000:2595357259535725966071251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit2e-0860.5
NC_003910:4234000:4238988423898842402381251Colwellia psychrerythraea 34H, complete genomesarcosine oxidase, beta subunit2e-0860.5
NC_000868:318434:3212723212723224111140Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit beta5e-0858.9
NC_002928:3781657:3789612378961237908651254Bordetella parapertussis 12822, complete genomesarcosine oxidase beta subunit8e-0858.5
NC_020541:1717140:1719831171983117211111281Rhodanobacter sp. 2APBS1, complete genomeglycine/D-amino acid oxidase, deaminating3e-0756.2
NC_000961:1532245:1534456153445615355891134Pyrococcus horikoshii OT3, complete genomesarcosine oxidase4e-0756.2
NC_009085:1232890:125257312525731253529957Acinetobacter baumannii ATCC 17978, complete genomeD-amino-acid dehydrogenase6e-0755.5
NC_015966:1661329:1685595168559516867851191Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeFAD dependent oxidoreductase8e-0755.1
NC_008148:2498000:2507596250759625088371242Rubrobacter xylanophilus DSM 9941, complete genomeFAD dependent oxidoreductase1e-0654.7
NC_013926:71186:8478584785859421158Aciduliprofundum boonei T469 chromosome, complete genomeFAD dependent oxidoreductase2e-0653.9
NC_014205:760428:7604287604287615701143Staphylothermus hellenicus DSM 12710 chromosome, complete genomeFAD dependent oxidoreductase2e-0653.5
NC_008313:886248:8909268909268922301305Ralstonia eutropha H16 chromosome 1, complete sequenceD-amino-acid dehydrogenase3e-0653.1
NC_017518:150991:1737591737591750151257Neisseria meningitidis NZ-05/33 chromosome, complete genomeD-amino acid dehydrogenase small subunit3e-0653.1
NC_015424:2316228:2353902235390223551671266Aeromonas veronii B565 chromosome, complete genomeD-amino acid dehydrogenase small subunit9e-0651.6
NC_013523:2560000:2574631257463125757641134Sphaerobacter thermophilus DSM 20745 chromosome 1, complete genomeFAD dependent oxidoreductase9e-0651.6