Pre_GI: BLASTP Hits

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Query: NC_007613:1533024:1538073 Shigella boydii Sb227, complete genome

Start: 1538073, End: 1538483, Length: 411

Host Lineage: Shigella boydii; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is an isolate from an epidemic that took place in China in the 1950s. Causes dysentery. This genus is named for the Japanese scientist (Shiga) who first discovered these organisms in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. These organisms are human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, causing over 160 million cases of infection and 1 million deaths yearly worldwide. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. are extremely virulent organisms that can cause an active infection after a very low exposure. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining. Shigella boydii is uncommon except in India, where it was first isolated. Progression to clinical dysentery occurs in most patients infected with this organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009800:1657550:167831916783191678879561Escherichia coli HS, complete genomediamine N-acetyltransferase3e-76282
NC_011283:2836000:291750829175082918068561Klebsiella pneumoniae 342 chromosome, complete genomeGNAT family acetyltransferase2e-70264
NC_013850:2846069:287987628798762880436561Klebsiella variicola At-22 chromosome, complete genomeDiamine N-acetyltransferase2e-70264
NC_010694:1052722:105699810569981057564567Erwinia tasmaniensis, complete genomeSpermidine N1-acetyltransferase3e-60229
NC_006322:1959918:196312119631211963663543Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-45180
NC_013446:2961647:298851029885102988998489Comamonas testosteroni CNB-2, complete genomeGCN5-related N-acetyltransferase5e-44176
NC_015563:4383000:440430844043084404838531Delftia sp. Cs1-4 chromosome, complete genomediamine N-acetyltransferase2e-43173
NC_007651:72952:864438644387027585Burkholderia thailandensis E264 chromosome I, complete sequencespermidine n(1)-acetyltransferase1e-41168
NC_009076:106807:123226123226123786561Burkholderia pseudomallei 1106a chromosome I, complete sequencediamine N-acetyltransferase2e-40164
NC_009074:94000:109990109990110550561Burkholderia pseudomallei 668 chromosome I, complete sequencediamine N-acetyltransferase2e-40164
NC_015382:172213:174767174767175312546Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceputative acetyltransferase6e-37152
NC_004461:1:356513565136148498Staphylococcus epidermidis ATCC 12228, complete genomespermidine acetyltransferase1e-29128
NC_011999:936500:938383938383938880498Macrococcus caseolyticus JCSC5402, complete genomespermidine acetyltransferase2e-29127
NC_016935:4233223:427406842740684274589522Paenibacillus mucilaginosus 3016 chromosome, complete genomeGNAT family acetyltransferase3e-1477.4
NC_015690:4469775:451824245182424518763522Paenibacillus mucilaginosus KNP414 chromosome, complete genomeGNAT family acetyltransferase3e-1477.4
NC_006138:23902:408104081041337528Desulfotalea psychrophila LSv54, complete genomesimilar to acetyltransferase7e-1372.8
NC_013406:2207520:221452822145282215067540Paenibacillus sp. Y412MC10 chromosome, complete genomeGCN5-like N-acetyltransferase1e-1272
NC_018645:4104302:411955641195564120188633Desulfobacula toluolica Tol2, complete genomeN-acetyltransferase GCN57e-1269.3
NC_014376:597000:623003623003623542540Clostridium saccharolyticum WM1 chromosome, complete genomeGCN5-related N-acetyltransferase9e-1165.5
NC_016629:1111619:112092811209281121467540Desulfovibrio africanus str. Walvis Bay chromosome, completeN-acetyltransferase GCN51e-1065.1
NC_013411:1168049:118481611848161185403588Geobacillus sp. Y412MC61, complete genomeGCN5-related N-acetyltransferase2e-0961.6
NC_014915:308056:324823324823325410588Geobacillus sp. Y412MC52 chromosome, complete genomeGCN5-related N-acetyltransferase2e-0961.6
NC_019908:852230:869161869161869658498Brachyspira pilosicoli P43/6/78 chromosome, complete genomeribosomal-protein-alanine acetyltransferase1e-0961.6
NC_015500:900807:913193913193913717525Treponema brennaborense DSM 12168 chromosome, complete genomeGCN5-related N-acetyltransferase3e-0960.8
NC_016582:9664000:967312196731219673612492Streptomyces bingchenggensis BCW-1 chromosome, complete genomeN-acetyltransferase GCN53e-0960.8
NC_014483:1431352:143451614345161435079564Paenibacillus polymyxa E681 chromosome, complete genomehypothetical protein4e-0960.5
NC_017059:31564:487304873049356627Rhodospirillum photometricum DSM 122, complete genomeN-acetyltransferase GCN54e-0960.1
NC_016641:3711972:371482937148293715392564Paenibacillus terrae HPL-003 chromosome, complete genomeacetyltransferase5e-0959.7
NC_014150:233194:251673251673252173501Brachyspira murdochii DSM 12563 chromosome, complete genomeGCN5-related N-acetyltransferase5e-0959.7
NC_016584:487613:501601501601502173573Desulfosporosinus orientis DSM 765 chromosome, complete genomeacetyltransferase, ribosomal protein N-acetylase1e-0858.5
NC_016751:1604048:162075316207531621283531Marinitoga piezophila KA3 chromosome, complete genomeacetyltransferase, ribosomal protein N-acetylase2e-0858.2
NC_014624:2478985:248825524882552488800546Eubacterium limosum KIST612 chromosome, complete genomeacetyltransferase1e-0858.2
NC_013169:1845735:1858223185822318593021080Kytococcus sedentarius DSM 20547, complete genomeacetyltransferase, ribosomal protein N-acetylase1e-0858.2
NC_016109:4581467:459366145936614594218558Kitasatospora setae KM-6054, complete genomeputative acetyltransferase2e-0857.8
NC_015660:1918307:192669519266951927294600Geobacillus thermoglucosidasius C56-YS93 chromosome, completeGCN5-like N-acetyltransferase2e-0857.8
NC_016593:2447938:245923224592322459738507Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-acetyltransferase GCN52e-0857.8
NC_020210:1704500:175594217559421756541600Geobacillus sp. GHH01, complete genomeGCN5-related N-acetyltransferase2e-0857.8
NC_015555:1450704:145399514539951454558564Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeGCN5-related N-acetyltransferase3e-0857.4
NC_017243:1499757:150416315041631504663501Brachyspira intermedia PWS/A chromosome, complete genomeacetyltransferase, GT family3e-0857
NC_015164:1158796:117459811745981175155558Bacteroides salanitronis DSM 18170 chromosome, complete genomeGCN5-related N-acetyltransferase4e-0857
NC_007777:2459357:247110424711042471685582Frankia sp. CcI3, complete genomeGCN5-related N-acetyltransferase4e-0857
NC_014614:2359046:236737223673722367950579Clostridium sticklandii, complete genomeGCN5-related N-acetyltransferase6e-0856.2
NC_013929:6526745:654876765487676549378612Streptomyces scabiei 87.22 chromosome, complete genomeacetyltransferase1e-0755.5
NC_021064:1789980:180799318079931808700708Propionibacterium avidum 44067, complete genomeputative ribosomal-protein-alanine acetyltransferase1e-0755.1
NC_014410:1527405:153164115316411532192552Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,GCN5-related N-acetyltransferase1e-0755.1
NC_019970:1457794:146708914670891467640552Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeacetyltransferase, ribosomal protein N-acetylase1e-0755.1
NC_010407:32960:463124631246980669Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative GCN5-related N-acetyltransferase1e-0755.1
NC_015958:1465631:146980414698041470373570Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeGCN5-like N-acetyltransferase1e-0755.1
NC_002506:324552:324552324552325088537Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeacetyltransferase, putative2e-0754.7
NC_002506:370629:383932383932384468537Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completeacetyltransferase, putative2e-0754.7
NC_016446:49618:496184961850154537Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein2e-0754.7
NC_016945:324519:324519324519325055537Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-0754.7
NC_016945:370471:383751383751384287537Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-0754.7
NC_017095:1333810:134802813480281348519492Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeacetyltransferase, ribosomal protein N-acetylase2e-0754.7
NC_014210:5309121:532542953254295326004576Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,GCN5-related N-acetyltransferase2e-0754.3
NC_016935:4233223:427096342709634271526564Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0753.9
NC_015690:4469775:451632945163294516892564Paenibacillus mucilaginosus KNP414 chromosome, complete genomehypothetical protein3e-0753.9
NC_007954:1494291:150296115029611503917957Shewanella denitrificans OS217, complete genomeMaoC-like dehydratase3e-0753.9
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-0753.9
NC_012225:377441:379222379222379722501Brachyspira hyodysenteriae WA1, complete genomeacetyltransferase, GT family4e-0753.5
NC_004193:375416:388469388469388972504Oceanobacillus iheyensis HTE831, complete genomehypothetical protein6e-0753.1
NC_010556:2328303:233468723346872335196510Exiguobacterium sibiricum 255-15, complete genomeGCN5-related N-acetyltransferase7e-0752.8
NC_009434:4140362:414993741499374150503567Pseudomonas stutzeri A1501, complete genomeflagellin modification protein FlmH7e-0752.8
NC_007492:4563981:458743545874354587947513Pseudomonas fluorescens PfO-1, complete genomeGCN5-related N-acetyltransferase7e-0752.8
NC_004663:1365429:136601613660161366555540Bacteroides thetaiotaomicron VPI-5482, complete genomeacetyltransferase6e-0752.8
NC_018665:2163713:217286421728642173352489Exiguobacterium antarcticum B7 chromosome, complete genomeGCN5-related N-acetyltransferase6e-0752.8
NC_013895:117429:134107134107134790684Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeacetyltransferase, GNAT family9e-0752.4
NC_009832:1664238:166579416657941666408615Serratia proteamaculans 568, complete genomeGCN5-related N-acetyltransferase1e-0652.4
NC_009615:3993187:400082740008274001762936Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein1e-0651.6
NC_014364:4416467:442826344282634428829567Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeGCN5-related N-acetyltransferase1e-0651.6
NC_012856:604767:622220622220622786567Ralstonia pickettii 12D chromosome 1, complete genomeGCN5-related N-acetyltransferase2e-0651.6
NC_016815:1543308:154980615498061550363558Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceRkpP: Phosphinothricin N-acetyltransferase2e-0651.6
NC_014215:1929000:194643619464361947146711Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,ribosomal-protein-alanine acetyltransferase2e-0651.6
NC_014330:2409559:241052424105242410976453Brachyspira pilosicoli 95/1000 chromosome, complete genomeribosomal-protein-alanine acetyltransferase2e-0651.2
NC_013061:4712051:473792847379284738473546Pedobacter heparinus DSM 2366, complete genomeGCN5-related N-acetyltransferase4e-0650.1
NC_013595:4951396:497419349741934974753561Streptosporangium roseum DSM 43021, complete genomeGCN5-related N-acetyltransferase4e-0650.1
NC_015391:2523451:252989925298992530399501Carnobacterium sp. 17-4 chromosome, complete genomeputative N-acetyltransferase, GNAT family5e-0649.7
NC_012731:2650603:266817026681702668793624Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative acetyltransferase5e-0649.7
NC_013406:5066769:510451951045195105067549Paenibacillus sp. Y412MC10 chromosome, complete genomeGCN5-like N-acetyltransferase5e-0649.7
NC_009718:1024000:103602010360201036463444Fervidobacterium nodosum Rt17-B1, complete genomeGCN5-related N-acetyltransferase6e-0649.7
NC_016845:2691129:270871627087162709294579Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative acetyltransferase6e-0649.7
NC_014734:353159:360803360803361345543Paludibacter propionicigenes WB4 chromosome, complete genomegcn5-related N-acetyltransferase9e-0648.9
NC_010516:3545017:354782935478293548362534Clostridium botulinum B1 str. Okra, complete genomeacetyltransferase, GNAT family9e-0648.9