Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1753414 Thermobifida fusca YX, complete genome

Start: 1753414, End: 1753851, Length: 438

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002516:1031386:103717210371721037525354Pseudomonas aeruginosa PAO1, complete genomeprobable arsenate reductase9e-1475.5
NC_015276:2804874:280817928081792808520342Marinomonas mediterranea MMB-1 chromosome, complete genomearsenate reductase4e-1270.1
NC_005085:786851:791756791756792106351Chromobacterium violaceum ATCC 12472, complete genomeprobable arsenate reductase (glutaredoxin)1e-1168.6
NC_006351:3159630:316581431658143166170357Burkholderia pseudomallei K96243 chromosome 2, complete sequencearsenate reductase5e-1166.6
NC_007435:1825741:183196718319671832323357Burkholderia pseudomallei 1710b chromosome II, complete sequencearsenate reductase5e-1166.6
NC_009078:3087759:309335530933553093711357Burkholderia pseudomallei 1106a chromosome II, complete sequencearsenate reductase5e-1166.6
NC_009075:3113393:312040631204063120762357Burkholderia pseudomallei 668 chromosome II, complete sequencearsenate reductase5e-1166.6
NC_017187:1305805:132243413224341322784351Arcobacter butzleri ED-1, complete genomearsenate reductase7e-1165.9
NC_008702:2259430:226688922668892267239351Azoarcus sp. BH72, complete genomearsenate reductase6e-1062.8
NC_008601:1518136:152040115204011520820420Francisella tularensis subsp. novicida U112, complete genomearsenate reductase7e-1062.8
NC_008835:1483237:148784614878461488202357Burkholderia mallei NCTC 10229 chromosome I, complete sequencearsenate reductase9e-1062.4
NC_008784:1151305:115830811583081158664357Burkholderia mallei SAVP1 chromosome I, complete sequencearsenate reductase9e-1062.4
NC_009079:2339756:234522423452242345580357Burkholderia mallei NCTC 10247 chromosome I, complete sequencearsenate reductase9e-1062.4
NC_006349:2311817:231788923178892318245357Burkholderia mallei ATCC 23344 chromosome 2, complete sequencearsenate reductase9e-1062.4
NC_010677:397629:413031413031413450420Francisella tularensis subsp. mediasiatica FSC147, complete genomearsenate reductase2e-0960.8
NC_014733:1857020:187542018754201875776357Methylovorus sp. MP688 chromosome, complete genomearsenate reductase3e-0960.8
NC_009749:558171:570953570953571300348Francisella tularensis subsp. holarctica FTA, complete genomearsenate reductase3e-0960.5
NC_007880:556334:569104569104569451348Francisella tularensis subsp. holarctica, complete genomearsenate reductase3e-0960.5
NC_008369:557941:572826572826573173348Francisella tularensis subsp. holarctica OSU18, complete genomearsenate reductase (glutaredoxin)3e-0960.5
NC_009257:386283:399073399073399420348Francisella tularensis subsp. tularensis WY96-3418 chromosome,ArsC family arsenate permease3e-0960.5
NC_008245:1577297:158473715847371585102366Francisella tularensis subsp. tularensis FSC 198, complete genomearsenate reductase3e-0960.5
NC_006570:1577491:158493115849311585296366Francisella tularensis subsp. tularensis Schu 4, complete genomearsenate reductase3e-0960.5
NC_016933:1653241:166068116606811661046366Francisella tularensis TIGB03 chromosome, complete genomeArsenate reductase3e-0960.5
NC_016937:1577334:158477415847741585139366Francisella tularensis subsp. tularensis TI0902 chromosome,Arsenate reductase3e-0960.5
NC_016613:2628843:264396426439642644314351Vibrio sp. EJY3 chromosome 1, complete sequencearsenate reductase4e-0960.1
NC_014500:2019113:202676220267622027193432Dickeya dadantii 3937 chromosome, complete genomearsenate reductase5e-0959.7
NC_020418:2718500:272258627225862722939354Morganella morganii subsp. morganii KT, complete genomeArsenate reductase5e-0959.7
NC_007650:2901751:290763829076382907994357Burkholderia thailandensis E264 chromosome II, complete sequencearsenate reductase7e-0959.3
NC_012880:3645304:365136736513673651795429Dickeya dadantii Ech703, complete genomearsenate reductase9e-0958.9
NC_010336:1335558:135195413519541352301348Francisella philomiragia subsp. philomiragia ATCC 25017, completearsenate reductase1e-0858.9
NC_012912:2800884:281319328131932813624432Dickeya zeae Ech1591, complete genomearsenate reductase1e-0858.5
NC_013592:2703327:271804227180422718470429Dickeya dadantii Ech586, complete genomearsenate reductase3e-0857.4
NC_017511:1812000:183457718345771834930354Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeprotein ArsC5e-0856.6
NC_011035:1908000:193073419307341931087354Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein ArsC5e-0856.6
CP002185:3822470:384571738457173846157441Escherichia coli W, complete genomearsenate reductase9e-0855.8
CP002516:246767:259916259916260356441Escherichia coli KO11, complete genomearsenate reductase9e-0855.8
NC_016902:246767:259916259916260356441Escherichia coli KO11FL chromosome, complete genomearsenate reductase9e-0855.8
NC_008258:3581583:358648935864893586914426Shigella flexneri 5 str. 8401, complete genomearsenate reductase2e-0754.7
NC_004337:3590323:362670336267033627128426Shigella flexneri 2a str. 301, complete genomearsenate reductase2e-0754.7
NC_000913:3624826:364826036482603648685426Escherichia coli K12, complete genomearsenate reductase2e-0754.7
CU928160:3709081:371393337139333714358426Escherichia coli IAI1 chromosome, complete genomearsenate reductase2e-0754.7
NC_010473:3722571:374600537460053746430426Escherichia coli str. K-12 substr. DH10B, complete genomearsenate reductase2e-0754.7
NC_010468:231000:242794242794243219426Escherichia coli ATCC 8739, complete genomearsenate reductase2e-0754.7
NC_004741:4132056:414832041483204148745426Shigella flexneri 2a str. 2457T, complete genomearsenate reductase2e-0754.7
NC_009800:3685651:369274836927483693173426Escherichia coli HS, complete genomearsenate reductase2e-0754.7
NC_007613:3470314:349519734951973495622426Shigella boydii Sb227, complete genomearsenate reductase2e-0754.7
NC_004337:3621985:362670336267033627128426Shigella flexneri 2a str. 301, complete genomearsenate reductase2e-0754.7
AC_000091:3976888:398975339897533990178426Escherichia coli W3110 DNA, complete genomearsenate reductase2e-0754.7
NC_013364:4306000:430812743081274308552426Escherichia coli O111:H- str. 11128, complete genomearsenate reductase2e-0754.7
NC_017328:3655876:365995936599593660384426Shigella flexneri 2002017 chromosome, complete genomeArsenate reductase2e-0754.7
NC_016822:3946500:394847039484703948895426Shigella sonnei 53G, complete genomearsenate reductase2e-0754.7
NC_013361:4566779:457071745707174571142426Escherichia coli O26:H11 str. 11368 chromosome, complete genomearsenate reductase2e-0754.7
NC_012967:3549880:358092735809273581352426Escherichia coli B str. REL606 chromosome, complete genomearsenate reductase2e-0754.7
NC_012947:248000:259824259824260249426Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completearsenate reductase2e-0754.7
NC_012759:3529657:353675435367543537179426Escherichia coli BW2952 chromosome, complete genomearsenate reductase2e-0754.7
NC_011741:3709081:371393337139333714358426Escherichia coli IAI1 chromosome, complete genomearsenate reductase2e-0754.7
CU928145:3983432:401504540150454015470426Escherichia coli 55989 chromosome, complete genomearsenate reductase3e-0753.9
AP010958:4313462:431716943171694317594426Escherichia coli O103:H2 str. 12009 DNA, complete genomearsenate reductase ArsC3e-0753.9
NC_009801:3956917:396176939617693962194426Escherichia coli E24377A, complete genomearsenate reductase3e-0753.9
NC_011748:3983432:401504540150454015470426Escherichia coli 55989, complete genomearsenate reductase3e-0753.9
NC_011415:3887997:389509438950943895519426Escherichia coli SE11 chromosome, complete genomearsenate reductase3e-0753.9
NC_013353:4313462:431716943171694317594426Escherichia coli O103:H2 str. 12009, complete genomearsenate reductase3e-0753.9
NC_010102:4557037:455760945576094558037429Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0753.9
NC_015138:4103457:410416041041604104591432Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completearsenate reductase3e-0753.5
NC_008687:302450:318359318359318784426Paracoccus denitrificans PD1222 chromosome 2, complete sequencearsenate reductase4e-0753.5
NC_011894:5787990:580272058027205803145426Methylobacterium nodulans ORS 2060, complete genomearsenate reductase5e-0753.1
NC_011071:2207385:222099622209962221415420Stenotrophomonas maltophilia R551-3, complete genomearsenate reductase7e-0752.8
NC_011894:5787990:583236958323695832794426Methylobacterium nodulans ORS 2060, complete genomearsenate reductase9e-0752.4
NC_009425:63709:867958679587220426Enterobacter sp. 638 plasmid pENTE01, complete sequencearsenate reductase1e-0652
NC_010498:3838419:386166438616643862089426Escherichia coli SMS-3-5, complete genomearsenate reductase (glutaredoxin)2e-0651.2
NC_009720:4367584:438903343890334389467435Xanthobacter autotrophicus Py2, complete genomearsenate reductase6e-0649.7
NC_010170:4800000:480888148088814809303423Bordetella petrii, complete genomearsenate reductase6e-0649.7